RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 A6NDX4 124 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 OR11H12B2RN74 326 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 FNDC10F2Z333 226 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 SRSF3P84103 164 aaKnown RBP6.51□□□□□ -1.37
BRCA1-208ENST00000468300 UBE2V1Q13404 147 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 SPSB3Q6PJ21 355 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 TMEM219Q86XT9 240 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 OR11H1Q8NG94 326 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 OR11H2Q8NH07 326 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 GNPNAT1Q96EK6 184 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-208ENST00000468300 ENY2Q9NPA8 101 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 PARP11Q9NR21 331 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 TIMM9Q9Y5J7 89 aa6.51□□□□□ -1.37
BRCA1-208ENST00000468300 HECTD1Q9ULT8 2610 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 SH2D7A6NKC9 451 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-208ENST00000468300 YIF1AO95070 293 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 HLA-DRB1P01911 266 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 TCL1AP56279 114 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 CD69Q07108 199 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 FXYD3Q14802 87 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 PEA15Q15121 130 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 KHDC1LQ5JSQ8 128 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 SVBPQ8N300 66 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 OR2T6Q8NHC8 308 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 F11RQ9Y624 299 aaKnown RBP6.5□□□□□ -1.37
BRCA1-208ENST00000468300 NCBP2LA6PVI3 153 aaKnown RBP6.5□□□□□ -1.37
BRCA1-208ENST00000468300 F5H768 121 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 PPP1R2P9O14990 202 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 TSPAN13O95857 204 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 BRS3P32247 399 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 ERHP84090 104 aaKnown RBP6.5□□□□□ -1.37
BRCA1-208ENST00000468300 KLK9Q2XQG4 91 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 ZNF705AQ6ZN79 300 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-208ENST00000468300 OCC1Q8TAD7 63 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 GGTLC1Q9BX51 225 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 RPRMQ9NS64 109 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 KLK9Q9UKQ9 250 aa6.5□□□□□ -1.37
BRCA1-208ENST00000468300 TFPI2P48307 235 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 CCL20P78556 96 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 DEFB112Q30KQ8 113 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 FFAR4Q5NUL3 377 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 DNLZQ5SXM8 178 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 Q6ZRG5 221 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 RPP25LQ8N5L8 163 aaKnown RBP6.49□□□□□ -1.37
BRCA1-208ENST00000468300 OR1P1Q8NH06 330 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 KIAA1456Q9P272 454 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 I3L2K1 104 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 RS1O15537 224 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 IGHV3-48P01763 117 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 LINC00869P0C866 280 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 DEFA4P12838 97 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 PLGLAQ15195 96 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 C4orf48Q5BLP8 95 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 COL5A1-AS1Q5SY13 56 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 EIF5AL1Q6IS14 154 aaKnown RBP6.49□□□□□ -1.37
BRCA1-208ENST00000468300 HSD17B13Q7Z5P4 300 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-208ENST00000468300 TTC9CQ8N5M4 171 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 NPVFQ9HCQ7 196 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 PSG8Q9UQ74 426 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
BRCA1-208ENST00000468300 OR7C2O60412 319 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 FLNAP21333 2647 aaKnown RBP6.49□□□□□ -1.37
BRCA1-208ENST00000468300 SERF2P84101 59 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 PRR20EP86478 221 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 PRR20CP86479 221 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 PRR20DP86480 221 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 PRR20BP86481 221 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 PRR20AP86496 221 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 Q6ZS46 218 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 OR8I2Q8N0Y5 310 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 ARPC1AQ92747 370 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 ZNF414Q96IQ9 312 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 VPREB3Q9UKI3 123 aa6.49□□□□□ -1.37
BRCA1-208ENST00000468300 NPIPB5A8MRT5 1133 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 UMAD1C9J7I0 102 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 H3BUX3 64 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 AGPAT2O15120 278 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 PRH1P02810 166 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 SNCAP37840 140 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 CAMPP49913 170 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 PLP1P60201 277 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 ZNF664Q8N3J9 261 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 SCGB1C1Q8TD33 95 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 ISOC2Q96AB3 205 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 RAX2Q96IS3 184 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 SLC25A33Q9BSK2 321 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 WNT10AQ9GZT5 417 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 PSMB11A5LHX3 300 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-208ENST00000468300 K7EIM0 57 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 OPRK1P41145 380 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 IER3P46695 156 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 HIST1H2BAQ96A08 127 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 SLC45A2Q9UMX9 530 aa6.48□□□□□ -1.37
BRCA1-208ENST00000468300 IGLV11-55A0A075B6I3 123 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 ZNF705GA8MUZ8 300 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms