RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 IGHV3OR16-13A0A075B7E8 117 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 IGHV3-74A0A0B4J1X5 117 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 IGSF23A1L1A6 192 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 SNRPGP15A8MWD9 76 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 FAM25EA8MYX2 175 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 LGALS9O00182 355 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 NDUFA4O00483 81 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 CLN5O75503 358 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 IFNA10P01566 189 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 FOLR2P14207 255 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 CXCL3P19876 107 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 MFAP4P55083 255 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 DEFA1P59665 94 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 DEFA3P59666 94 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 GAMTQ14353 236 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 USF2Q15853 346 aaPredicted RBP3.68□□□□□ -1.82
TRIM27-204ENST00000467742 ODF3L2Q3SX64 289 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 SPANXN5Q5MJ07 72 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 TOMM20LQ6UXN7 152 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 TMEM14EPQ6UXP3 125 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 TMEM182Q6ZP80 229 aaPredicted RBP3.68□□□□□ -1.82
TRIM27-204ENST00000467742 C9orf47Q6ZRZ4 202 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 GPHB5Q86YW7 130 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 TMEM61Q8N0U2 210 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 OR11H7Q8NGC8 314 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 OR1L6Q8NGR2 347 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 OR4X1Q8NH49 305 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 RNASEH2CQ8TDP1 164 aaKnown RBP3.68□□□□□ -1.82
TRIM27-204ENST00000467742 ACY3Q96HD9 319 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 MCRIP2Q9BUT9 160 aaKnown RBP3.68□□□□□ -1.82
TRIM27-204ENST00000467742 PALMDQ9NP74 551 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 OR5AC2Q9NZP5 309 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 THYN1Q9P016 225 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 GSKIPQ9P0R6 139 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 LSM5Q9Y4Y9 91 aaKnown RBP3.68□□□□□ -1.82
TRIM27-204ENST00000467742 DNAH1Q9P2D7 4330 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 STAB2Q8WWQ8 2551 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 SORL1Q92673 2214 aa3.68□□□□□ -1.82
TRIM27-204ENST00000467742 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 RYR1P21817 5038 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 TRAV14DV4A0A0A6YYC5 116 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 IGHV4-28A0A0C4DH34 117 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 IGHV3-66A0A0C4DH42 116 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 ZNF320A2RRD8 509 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 C5orf51A6NDU8 294 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 G3V3Q6 166 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 CORTO00230 105 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 CYB5BO43169 146 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 GNG7O60262 68 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 PRAF2O60831 178 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 IFNA21P01568 189 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 METTL15P1P0C7V9 234 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 C8orf88P0DMB2 117 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 GP9P14770 177 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 CBLN1P23435 193 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 OR10J1P30954 320 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 AMTP48728 403 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 SUB1P53999 127 aaKnown RBP eCLIP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 S100A10P60903 97 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 RRAS2P62070 204 aaPredicted RBP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 ZNF90Q03938 601 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 DCTN2Q13561 401 aaKnown RBP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 OXA1LQ15070 435 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 FCN2Q15485 313 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 LRRC37A5PQ49AS3 106 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 OR8G2PQ6IF36 304 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 SPSB3Q6PJ21 355 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 ZNF600Q6ZNG1 722 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 THAP8Q8NA92 274 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 TMEM116Q8NCL8 245 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 SMIM8Q96KF7 97 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 C2orf50Q96LR7 162 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 ATP6V0BQ99437 205 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 TXN2Q99757 166 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 C20orf24Q9BUV8 137 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 HIPK2Q9H2X6 1198 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 DAZ1Q9NQZ3 744 aaKnown RBP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 SIGLEC8Q9NYZ4 499 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 PSENENQ9NZ42 101 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 PAIP2BQ9ULR5 123 aaKnown RBP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 ZNF256Q9Y2P7 627 aaPredicted RBP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 LSM4Q9Y4Z0 139 aaKnown RBP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 PUS1Q9Y606 427 aaKnown RBP eCLIP3.67□□□□□ -1.82
TRIM27-204ENST00000467742 U3KQ87 197 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 LYSTQ99698 3801 aa3.67□□□□□ -1.82
TRIM27-204ENST00000467742 AGRNO00468 2067 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 IGHV7-4-1A0A0J9YVY3 117 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 FAM24AA6NFZ4 105 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 NUPL2O15504 423 aaKnown RBP3.66□□□□□ -1.82
TRIM27-204ENST00000467742 SSNA1O43805 119 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 TSC22D2O75157 780 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 MED6O75586 246 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 DEDDO75618 318 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 CST7O76096 145 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 IFNA4P05014 189 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 IL4P05112 153 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 CD7P09564 240 aa3.66□□□□□ -1.82
TRIM27-204ENST00000467742 SLC25A4P12235 298 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms