RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 RAB19A4D1S5 217 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 H3BRN7 92 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 I3L521 148 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 LGALS1P09382 135 aaKnown RBP9.99□□□□□ -0.81
COL4A1-202ENST00000467182 ARL14EPLP0DKL9 152 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 C8orf88P0DMB2 117 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 C18orf65Q6ZTR6 163 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 SUN5Q8TC36 379 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 OR5B12Q96R08 314 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 PBDC1Q9BVG4 233 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 SLC25A39Q9BZJ4 359 aaPredicted RBP9.99□□□□□ -0.81
COL4A1-202ENST00000467182 TECRQ9NZ01 308 aaKnown RBP9.99□□□□□ -0.81
COL4A1-202ENST00000467182 PEF1Q9UBV8 284 aaKnown RBP9.99□□□□□ -0.81
COL4A1-202ENST00000467182 HIGD1AQ9Y241 93 aa9.99□□□□□ -0.81
COL4A1-202ENST00000467182 CXorf1O96002 111 aa9.98□□□□□ -0.81
COL4A1-202ENST00000467182 GCHFRP30047 84 aa9.98□□□□□ -0.81
COL4A1-202ENST00000467182 CDX1P47902 265 aaPredicted RBP9.98□□□□□ -0.81
COL4A1-202ENST00000467182 PROK1P58294 105 aa9.98□□□□□ -0.81
COL4A1-202ENST00000467182 RELQ04864 619 aaPredicted RBP9.98□□□□□ -0.81
COL4A1-202ENST00000467182 FAM209BQ5JX69 171 aa9.98□□□□□ -0.81
COL4A1-202ENST00000467182 HIST2H2BDQ6DRA6 164 aa9.98□□□□□ -0.81
COL4A1-202ENST00000467182 SHANK2-AS3Q9BTD1 123 aa9.98□□□□□ -0.81
COL4A1-202ENST00000467182 IGHV3OR16-8A0A075B7F1 116 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 C9JQL5 133 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 NDUFA4O00483 81 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 CD5P06127 495 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 CD28P10747 220 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 GUK1Q16774 197 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 KHDC3LQ587J8 217 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 UNQ9165/PRO28630Q6UXU0 137 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 OR4F5Q8NH21 305 aa9.97□□□□□ -0.81
COL4A1-202ENST00000467182 NF1P21359 2839 aa9.96□□□□□ -0.81
COL4A1-202ENST00000467182 IGHV4OR15-8A0A075B7B6 117 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 A0A087WW49 117 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 MRPS12O15235 138 aaKnown RBP9.96□□□□□ -0.82
COL4A1-202ENST00000467182 GGCTO75223 188 aaKnown RBP9.96□□□□□ -0.82
COL4A1-202ENST00000467182 ATP6V1G1O75348 118 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 GP9P14770 177 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 PSMB3P49720 205 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 TAS2R45P59539 299 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 KRTAP10-3P60369 221 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 ICAM4Q14773 271 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 LEMD1Q68G75 181 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 UQCC3Q6UW78 93 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 PQLC2Q6ZP29 291 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 FXYD5Q96DB9 178 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 CITED4Q96RK1 184 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 RARRES2Q99969 163 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 TMEM231Q9H6L2 316 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 GNG13Q9P2W3 67 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 RNF114Q9Y508 228 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 U3KQE9 123 aa9.96□□□□□ -0.82
COL4A1-202ENST00000467182 RBFOX3A6NFN3 312 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 ZNF98A6NK75 572 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 PYYP10082 97 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 HAGHQ16775 308 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 TOR2AQ5JU69 321 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 C4orf3Q8WVX3 66 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 WFDC12Q8WWY7 111 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 OR51M1Q9H341 326 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 TMEM14CQ9P0S9 112 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 RABAC1Q9UI14 185 aa9.95□□□□□ -0.82
COL4A1-202ENST00000467182 OR7C2O60412 319 aa9.94□□□□□ -0.82
COL4A1-202ENST00000467182 APOHP02749 345 aaPredicted RBP9.94□□□□□ -0.82
COL4A1-202ENST00000467182 HSPB1P04792 205 aaKnown RBP9.94□□□□□ -0.82
COL4A1-202ENST00000467182 OR10J4P0C629 311 aa9.94□□□□□ -0.82
COL4A1-202ENST00000467182 BCL2P10415 239 aa9.94□□□□□ -0.82
COL4A1-202ENST00000467182 CRYBB3P26998 211 aa9.94□□□□□ -0.82
COL4A1-202ENST00000467182 C17orf77Q96MU5 243 aa9.94□□□□□ -0.82
COL4A1-202ENST00000467182 PAXXQ9BUH6 204 aa9.94□□□□□ -0.82
COL4A1-202ENST00000467182 MANBALQ9NQG1 85 aa9.94□□□□□ -0.82
COL4A1-202ENST00000467182 YTHDF2Q9Y5A9 579 aaKnown RBP9.94□□□□□ -0.82
COL4A1-202ENST00000467182 HAX1O00165 279 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 ZNF207O43670 478 aaKnown RBP9.93□□□□□ -0.82
COL4A1-202ENST00000467182 BUB3O43684 328 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 PAGE4O60829 102 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 IGLC2P0DOY2 106 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 PPT1P50897 306 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 DEFB136Q30KP8 78 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 IQCF2Q8IXL9 164 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.93□□□□□ -0.82
COL4A1-202ENST00000467182 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 RXFP4Q8TDU9 374 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 CITED2Q99967 270 aaPredicted RBP9.93□□□□□ -0.82
COL4A1-202ENST00000467182 TMEM167BQ9NRX6 74 aa9.93□□□□□ -0.82
COL4A1-202ENST00000467182 FAM74A7A6NL05 159 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 ADARB2-AS1A8MUL3 147 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 H3BQ15 152 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 IFNA1P01562 189 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 SRP19P09132 144 aaKnown RBP9.92□□□□□ -0.82
COL4A1-202ENST00000467182 EDN2P20800 178 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 CD81P60033 236 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 UBE2L3P68036 154 aaKnown RBP9.92□□□□□ -0.82
COL4A1-202ENST00000467182 REC114Q7Z4M0 266 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 C11orf44Q8N8P7 122 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 METTL26Q96S19 204 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms