RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 C1orf100Q5SVJ3 147 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 Q6ZS49 121 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 Q8WTZ3 238 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 TSC22D3Q99576 134 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 GFI1Q99684 422 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 PAXXQ9BUH6 204 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 RPRMQ9NS64 109 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 COMMD9Q9P000 198 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 DOK5Q9P104 306 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 DAPK2Q9UIK4 370 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 KCNK7Q9Y2U2 307 aa3.84□□□□□ -1.79
NCL-208ENST00000466274 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 IGKV1D-8A0A087WSZ0 117 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 A0A0J9YX75 114 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 CLN5O75503 358 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 WBP4O75554 376 aaKnown RBP3.83□□□□□ -1.8
NCL-208ENST00000466274 DUSP14O95147 198 aaKnown RBP3.83□□□□□ -1.8
NCL-208ENST00000466274 PRM2P04554 102 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 FCER2P06734 321 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 MYL12AP19105 171 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 AZU1P20160 251 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 CALB2P22676 271 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 NFYAP23511 347 aaPredicted RBP3.83□□□□□ -1.8
NCL-208ENST00000466274 GADD45AP24522 165 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 HNRNPA3P51991 378 aaKnown RBP3.83□□□□□ -1.8
NCL-208ENST00000466274 SUB1P53999 127 aaKnown RBP eCLIP3.83□□□□□ -1.8
NCL-208ENST00000466274 LYPD5Q6UWN5 251 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 TSPAN14Q8NG11 270 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 RHOXF1Q8NHV9 184 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 LGALS14Q8TCE9 139 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 RAB3CQ96E17 227 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 KLK11Q9UBX7 282 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 ORC6Q9Y5N6 252 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 TNXBP22105 4242 aa3.83□□□□□ -1.8
NCL-208ENST00000466274 PNMA8CA0A1B0GUJ8 204 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 IRGMA1A4Y4 181 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 RBFOX3A6NFN3 312 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 C9JCJ5 164 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 SULT1C2O00338 296 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 ISLRO14498 428 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 EI24O14681 340 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 TNFSF12O43508 249 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 GAGE7O76087 117 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 SNCAP37840 140 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 SLAQ13239 276 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 ARL6IP1Q15041 203 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 MRPL23Q16540 153 aaKnown RBP3.82□□□□□ -1.8
NCL-208ENST00000466274 LINC00612Q8N6U2 182 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 OR6F1Q8NGZ6 308 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 OR4X1Q8NH49 305 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 TMEM263Q8WUH6 116 aaKnown RBP3.82□□□□□ -1.8
NCL-208ENST00000466274 MAFIPQ8WZ33 124 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 PHYHIPQ92561 330 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 VSIG2Q96IQ7 327 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 CTDSP1Q9GZU7 261 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 FGF20Q9NP95 211 aaPredicted RBP3.82□□□□□ -1.8
NCL-208ENST00000466274 PPP1R14DQ9NXH3 145 aa3.82□□□□□ -1.8
NCL-208ENST00000466274 RCL1Q9Y2P8 373 aaKnown RBP3.82□□□□□ -1.8
NCL-208ENST00000466274 TRGV2A0A075B6R0 118 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 IGKV1D-13A0A0B4J2D9 117 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 A0A0D9SG52 128 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 A8MTW9 85 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 SNURFLB1AK76 121 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 M0R2Z0 102 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 BUB3O43684 328 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 IGKV1-13P0DP09 117 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 ZNF182P17025 639 aaPredicted RBP3.81□□□□□ -1.8
NCL-208ENST00000466274 DTYMKP23919 212 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 UCP1P25874 307 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 HSPA13P48723 471 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 DEFB1P60022 68 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 GAMTQ14353 236 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 SPINK13Q1W4C9 94 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 FFAR4Q5NUL3 377 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 LAIR2Q6ISS4 152 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 CNIH2Q6PI25 160 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 NEGR1Q7Z3B1 354 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 BPIFB6Q8NFQ5 453 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 OR52E5Q8NH55 327 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 RNASE8Q8TDE3 154 aaKnown RBP3.81□□□□□ -1.8
NCL-208ENST00000466274 BORCS5Q969J3 196 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 LINC01600Q96MT4 127 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 PLGRKTQ9HBL7 147 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 SDF2L1Q9HCN8 221 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 NSG2Q9Y328 171 aa3.81□□□□□ -1.8
NCL-208ENST00000466274 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.8□□□□□ -1.8
NCL-208ENST00000466274 F6UB75 175 aa3.8□□□□□ -1.8
NCL-208ENST00000466274 H7BYZ3 331 aa3.8□□□□□ -1.8
NCL-208ENST00000466274 CRXO43186 299 aaPredicted RBP3.8□□□□□ -1.8
NCL-208ENST00000466274 KRASP01116 189 aa3.8□□□□□ -1.8
NCL-208ENST00000466274 IL4P05112 153 aa3.8□□□□□ -1.8
NCL-208ENST00000466274 ELK1P19419 428 aa3.8□□□□□ -1.8
NCL-208ENST00000466274 OPRK1P41145 380 aa3.8□□□□□ -1.8
NCL-208ENST00000466274 MEOX2P50222 304 aa3.8□□□□□ -1.8
NCL-208ENST00000466274 YPEL3P61236 119 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms