RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TEX46H3BTG2 121 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 GNG7O60262 68 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 YIF1AO95070 293 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 IGKV1-17P01599 117 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 TRGV3P03979 118 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 CRYBA1P05813 215 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 CTSGP08311 255 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 OR5G3P0C626 314 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 CDX1P47902 265 aaPredicted RBP4.23□□□□□ -1.73
VPS41-211ENST00000466017 RND2P52198 227 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 B2MP61769 119 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 RHOGP84095 191 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 RUNX1Q01196 453 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 ECSCRQ19T08 205 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 C9orf152Q5JTZ5 239 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 FFAR4Q5NUL3 377 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 ZNF600Q6ZNG1 722 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 RPP25LQ8N5L8 163 aaKnown RBP4.23□□□□□ -1.73
VPS41-211ENST00000466017 BPIFCQ8NFQ6 507 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 OR1L4Q8NGR5 311 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 SUN5Q8TC36 379 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 Q8WTZ3 238 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 UBE2E2Q96LR5 201 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 PFDN5Q99471 154 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 SH3BGRL3Q9H299 93 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 SMDT1Q9H4I9 107 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 DNAJC4Q9NNZ3 241 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 MRPL27Q9P0M9 148 aaKnown RBP4.23□□□□□ -1.73
VPS41-211ENST00000466017 PXMP4Q9Y6I8 212 aa4.23□□□□□ -1.73
VPS41-211ENST00000466017 ITPR3Q14573 2671 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 HIVEP2P31629 2446 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 A0A1W2PPV4 95 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 ZNF705EA8MWA4 302 aaPredicted RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 NUPL2O15504 423 aaKnown RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 TCF21O43680 179 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 PRH1P02810 166 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 CLEC3BP05452 202 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 STAG3L2P0CL84 134 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 STAG3L3P0CL85 134 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 RD3LP0DJH9 198 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 APELAP0DMC3 54 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 TAGLN2P37802 199 aaKnown RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 RAB2AP61019 212 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 RHOBP62745 196 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 ZNF616Q08AN1 781 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 C15orf32Q32M92 178 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 MIC13Q5XKP0 118 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 IL34Q6ZMJ4 242 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 TMEM182Q6ZP80 229 aaPredicted RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 GPHB5Q86YW7 130 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 ZNF491Q8N8L2 437 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 STXBP6Q8NFX7 210 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 OR51G1Q8NGK1 321 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 OR10G4Q8NGN3 311 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 OR10G9Q8NGN4 311 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 OR10G7Q8NGN6 311 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 TMEM190Q8WZ59 177 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 MARC2Q969Z3 335 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 ACY3Q96HD9 319 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 NOL4LQ96MY1 436 aaPredicted RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 MRPL32Q9BYC8 188 aaKnown RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 TECRQ9NZ01 308 aaKnown RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 TEX15Q9BXT5 2789 aa4.22□□□□□ -1.73
VPS41-211ENST00000466017 ASH1LQ9NR48 2969 aaKnown RBP4.22□□□□□ -1.73
VPS41-211ENST00000466017 HECTD1Q9ULT8 2610 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 CENPEQ02224 2701 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 MFSD2BA6NFX1 497 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 K7EMT4 169 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 NDUFA4O00483 81 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 TGOLN2O43493 480 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 HYPMO75409 117 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 C8orf88P0DMB2 117 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 PSG1P11464 419 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 PSMB3P49720 205 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 PPT1P50897 306 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 TPPP2P59282 170 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 TAS2R45P59539 299 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 ZNF90Q03938 601 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 RELQ04864 619 aaPredicted RBP4.21□□□□□ -1.74
VPS41-211ENST00000466017 ZNF726P1Q15940 193 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 Q56UQ5 140 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 FAM74A1Q5RGS3 127 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 UQCC3Q6UW78 93 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 PATE2Q6UY27 113 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 PQLC2Q6ZP29 291 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 C19orf35Q6ZS72 473 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 Q6ZWC4 215 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 KLHDC1Q8N7A1 406 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 OR4F5Q8NH21 305 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 LINC01006Q8NI28 216 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 TMEM37Q8WXS4 190 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 ZNF414Q96IQ9 312 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 TXNDC17Q9BRA2 123 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 SCRT1Q9BWW7 348 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 VSIRQ9H7M9 311 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 ZNF355PQ9NSJ1 428 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 PEF1Q9UBV8 284 aaKnown RBP4.21□□□□□ -1.74
VPS41-211ENST00000466017 LINC00527Q9UJ94 153 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 FUT9Q9Y231 359 aa4.21□□□□□ -1.74
VPS41-211ENST00000466017 RFNGQ9Y644 331 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms