RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 LRRC20Q8TCA0 184 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 GATAD1Q8WUU5 269 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 SRSF12Q8WXF0 261 aaKnown RBP2.83□□□□□ -1.96
SCN3A-206ENST00000465043 C22orf15Q8WYQ4 148 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 TMEM190Q8WZ59 177 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 RNF5Q99942 180 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 RARRES2Q99969 163 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 PYGO2Q9BRQ0 406 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 NPCDR1Q9BY65 106 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 FNDC4Q9H6D8 234 aaPredicted RBP2.83□□□□□ -1.96
SCN3A-206ENST00000465043 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 NPVFQ9HCQ7 196 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 TNFRSF19Q9NS68 423 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 MED9Q9NWA0 146 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 WDR83OSQ9Y284 106 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 TBL2Q9Y4P3 447 aaKnown RBP2.83□□□□□ -1.96
SCN3A-206ENST00000465043 PXMP4Q9Y6I8 212 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 S4R3C0 116 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 COL12A1Q99715 3063 aa2.83□□□□□ -1.96
SCN3A-206ENST00000465043 PRRC2AP48634 2157 aaKnown RBP2.83□□□□□ -1.96
SCN3A-206ENST00000465043 USP9YO00507 2555 aaPredicted RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 FBN2P35556 2912 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 IGKV1OR2-108A0A075B7D4 117 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 IGHV7-81A0A0B4J1V7 117 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 TMEM218A2RU14 115 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 RAB19A4D1S5 217 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 MAP1LC3B2A6NCE7 125 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 OOSP1A8MZH6 123 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 UMAD1C9J7I0 102 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 C17orf112F2Z3M2 114 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 H3BUX3 64 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 TRIM77I1YAP6 450 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 TSPAN4O14817 238 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 NDUFA3O95167 84 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 MT-CO2P00403 227 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 IGHV3-23P01764 117 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 LINC00869P0C866 280 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 M6PRP20645 277 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 BRS3P32247 399 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 MAS1LP35410 378 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 GPX4P36969 197 aaPredicted RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 OPRK1P41145 380 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 PPT1P50897 306 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 RAB5CP51148 216 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 RND2P52198 227 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 CEBPGP53567 150 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 SUB1P53999 127 aaKnown RBP eCLIP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 ZNF90Q03938 601 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 EBI3Q14213 229 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 GUK1Q16774 197 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 TMEM249Q2WGJ8 235 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 BSXQ3C1V8 233 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 ACOT6Q3I5F7 207 aaPredicted RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 C9orf152Q5JTZ5 239 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 ATRAIDQ6UW56 229 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 IL34Q6ZMJ4 242 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 CENPVQ7Z7K6 275 aaPredicted RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 RPP25LQ8N5L8 163 aaKnown RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 EIF4E3Q8N5X7 224 aaKnown RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 LFNGQ8NES3 379 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 WFDC11Q8NEX6 87 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 LYPD6BQ8NI32 183 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 PIFOQ8TCI5 191 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 RXFP4Q8TDU9 374 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 SLC35E1Q96K37 410 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 SSX3Q99909 188 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 RASL11BQ9BPW5 248 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 HSPB9Q9BQS6 159 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 PSMG3Q9BT73 122 aaPredicted RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 GGACTQ9BVM4 153 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 SCRT1Q9BWW7 348 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 GGTLC1Q9BX51 225 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 PARD6GQ9BYG4 376 aaPredicted RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 MAP1LC3BQ9GZQ8 125 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 EIF5A2Q9GZV4 153 aaKnown RBP2.82□□□□□ -1.96
SCN3A-206ENST00000465043 SLC39A9Q9NUM3 307 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 DOK5Q9P104 306 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 GNG13Q9P2W3 67 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 LINC00527Q9UJ94 153 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 TIMM9Q9Y5J7 89 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 ABCA1O95477 2261 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 TACC2O95359 2948 aa2.82□□□□□ -1.96
SCN3A-206ENST00000465043 CR1P17927 2039 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 NAV3Q8IVL0 2385 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 CRYBG3Q68DQ2 2970 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 IGKV1D-37A0A075B6S9 117 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 TRAV5A0A0B4J249 113 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 CTXND1A0A1B0GTU2 59 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 RBFOX3A6NFN3 312 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 ZFP92A6NM28 416 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 F8W036 122 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 INS-IGF2F8WCM5 200 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 G3V318 75 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 ATP6V0E1O15342 81 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 CYB5BO43169 146 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 OR2J3O76001 311 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 HBE1P02100 147 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 APOC3P02656 99 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 CD5P06127 495 aa2.81□□□□□ -1.96
SCN3A-206ENST00000465043 SRP19P09132 144 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms