RNA–Protein interactions for RNA: ENST00000464956.1

USP40-211, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 185 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-211ENST00000464956 IGLV10-54A0A075B6I4 117 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 A0A087WWC5 75 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 IGKV1-6A0A0C4DH72 117 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 CCDC182A6NF36 153 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 SAC3D1A6NKF1 404 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 TRDCB7Z8K6 153 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 E9PI62 339 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 CORTO00230 105 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 SNAPC5O75971 98 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 SLC22A5O76082 557 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 TNFRSF6BO95407 300 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 IGKV1-17P01599 117 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 CD2P06729 351 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 OR2T7P0C7T2 308 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 NQO2P16083 231 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 HRH1P35367 487 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 GALR1P47211 349 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 TAS2R31P59538 309 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 ERVK-16P61578 105 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 RPL30P62888 115 aaKnown RBP1.45□□□□□ -2.18
USP40-211ENST00000464956 RPL18AQ02543 176 aaKnown RBP1.45□□□□□ -2.18
USP40-211ENST00000464956 RAB31Q13636 194 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 IDNKQ5T6J7 187 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 XP32Q5T750 250 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 GFI1BQ5VTD9 330 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 AWAT2Q6E213 333 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 PRR27Q6MZM9 219 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 STEAP1BQ6NZ63 245 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 Q6ZQT7 251 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 C6orf201Q7Z4U5 140 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 CCDC190Q86UF4 302 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 LINC00304Q8N9R0 145 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 OR10G4Q8NGN3 311 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 OR1S2Q8NGQ3 325 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 OR4X1Q8NH49 305 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 PRSS3P2Q8NHM4 247 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 LGALS14Q8TCE9 139 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 TSKUQ8WUA8 353 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 RFKQ969G6 155 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 SAT2Q96F10 170 aaPredicted RBP1.45□□□□□ -2.18
USP40-211ENST00000464956 DERL3Q96Q80 235 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 CHCHD7Q9BUK0 85 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 SLC25A32Q9H2D1 315 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 C12orf4Q9NQ89 552 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 TMEM140Q9NV12 185 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 PLEKHJ1Q9NW61 149 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 FKBP11Q9NYL4 201 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 TAS2R4Q9NYW5 299 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 RBMX2Q9Y388 322 aaKnown RBP1.45□□□□□ -2.18
USP40-211ENST00000464956 OR51B2Q9Y5P1 312 aa1.45□□□□□ -2.18
USP40-211ENST00000464956 A0A096LNI7 61 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 TRBV6-7A0A0A0MS04 114 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 TRAV12-3A0A0B4J271 114 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 TNFRSF11BO00300 401 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 FABP7O15540 132 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 EIF3GO75821 320 aaKnown RBP eCLIP1.44□□□□□ -2.18
USP40-211ENST00000464956 DIRAS3O95661 229 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 NPPAP01160 153 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 MT2AP02795 61 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 MT1FP04733 61 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 CD3GP09693 182 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 CD37P11049 281 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 PSG1P11464 419 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 SPRR2DP22532 72 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 PSMB9P28065 219 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 BDKRB2P30411 391 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 ATP6V1E1P36543 226 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 SNCAP37840 140 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 OPRK1P41145 380 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 RPS10P46783 165 aaKnown RBP1.44□□□□□ -2.18
USP40-211ENST00000464956 YPEL3P61236 119 aaPredicted RBP1.44□□□□□ -2.18
USP40-211ENST00000464956 VSNL1P62760 191 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 SUPT4H1P63272 117 aaKnown RBP1.44□□□□□ -2.18
USP40-211ENST00000464956 SRPXP78539 464 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 ERHP84090 104 aaKnown RBP1.44□□□□□ -2.18
USP40-211ENST00000464956 GINS1Q14691 196 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 POU2AF1Q16633 256 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 ANXA2RQ3ZCQ2 193 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 ZNF876PQ49A33 203 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 PCOTHQ58A44 107 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 OR8G2PQ6IF36 304 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 KRTAP11-1Q8IUC1 163 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 OR8I2Q8N0Y5 310 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 LGI3Q8N145 548 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 DAND5Q8N907 189 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 SPC24Q8NBT2 197 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 OR4C5Q8NGB2 326 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 OR8A1Q8NGG7 326 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 MARCH1Q8TCQ1 289 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 GPR148Q8TDV2 347 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 MUL1Q969V5 352 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 RRNAD1Q96FB5 475 aaKnown RBP1.44□□□□□ -2.18
USP40-211ENST00000464956 CYYR1Q96J86 154 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 C16orf45Q96MC5 204 aaPredicted RBP1.44□□□□□ -2.18
USP40-211ENST00000464956 TMEM222Q9H0R3 208 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 MIXL1Q9H2W2 232 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 C8orf4Q9NR00 106 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 IMPAD1Q9NX62 359 aa1.44□□□□□ -2.18
USP40-211ENST00000464956 PRNDQ9UKY0 176 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms