RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TMEM17Q86X19 198 aa6.28□□□□□ -1.4
APP-213ENST00000464867 C10orf126Q8N4M7 172 aa6.28□□□□□ -1.4
APP-213ENST00000464867 RAB24Q969Q5 203 aa6.28□□□□□ -1.4
APP-213ENST00000464867 PPP1R14DQ9NXH3 145 aa6.28□□□□□ -1.4
APP-213ENST00000464867 ELF5Q9UKW6 265 aaPredicted RBP6.28□□□□□ -1.4
APP-213ENST00000464867 CASQ2O14958 399 aaPredicted RBP6.27□□□□□ -1.41
APP-213ENST00000464867 CALRP27797 417 aaKnown RBP6.27□□□□□ -1.41
APP-213ENST00000464867 CBX5P45973 191 aa6.27□□□□□ -1.41
APP-213ENST00000464867 OR10A3P58181 314 aa6.27□□□□□ -1.41
APP-213ENST00000464867 RPS25P62851 125 aaKnown RBP6.27□□□□□ -1.41
APP-213ENST00000464867 AMTNQ6UX39 209 aa6.27□□□□□ -1.41
APP-213ENST00000464867 CCDC28AQ8IWP9 274 aa6.27□□□□□ -1.41
APP-213ENST00000464867 BAP18Q8IXM2 172 aa6.27□□□□□ -1.41
APP-213ENST00000464867 SLC35G3Q8N808 338 aa6.27□□□□□ -1.41
APP-213ENST00000464867 TMEM263Q8WUH6 116 aaKnown RBP6.27□□□□□ -1.41
APP-213ENST00000464867 NUDCD2Q8WVJ2 157 aa6.27□□□□□ -1.41
APP-213ENST00000464867 LINC00467Q9BRT7 94 aa6.27□□□□□ -1.41
APP-213ENST00000464867 DNAJC4Q9NNZ3 241 aa6.27□□□□□ -1.41
APP-213ENST00000464867 ENY2Q9NPA8 101 aa6.27□□□□□ -1.41
APP-213ENST00000464867 MRPL36Q9P0J6 103 aaKnown RBP6.27□□□□□ -1.41
APP-213ENST00000464867 ICOSQ9Y6W8 199 aa6.27□□□□□ -1.41
APP-213ENST00000464867 TRAV12-2A0A075B6T6 113 aa6.26□□□□□ -1.41
APP-213ENST00000464867 CRXO43186 299 aaPredicted RBP6.26□□□□□ -1.41
APP-213ENST00000464867 PGLYRP1O75594 196 aaPredicted RBP6.26□□□□□ -1.41
APP-213ENST00000464867 RD3LP0DJH9 198 aa6.26□□□□□ -1.41
APP-213ENST00000464867 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
APP-213ENST00000464867 OR10J1P30954 320 aa6.26□□□□□ -1.41
APP-213ENST00000464867 RPL5P46777 297 aaKnown RBP6.26□□□□□ -1.41
APP-213ENST00000464867 RPL37AP61513 92 aaKnown RBP6.26□□□□□ -1.41
APP-213ENST00000464867 HERV-K104P61576 105 aa6.26□□□□□ -1.41
APP-213ENST00000464867 ASAH1Q13510 395 aa6.26□□□□□ -1.41
APP-213ENST00000464867 GAMTQ14353 236 aa6.26□□□□□ -1.41
APP-213ENST00000464867 SPINK9Q5DT21 86 aa6.26□□□□□ -1.41
APP-213ENST00000464867 IDNKQ5T6J7 187 aa6.26□□□□□ -1.41
APP-213ENST00000464867 NANOGP1Q8N7R0 232 aa6.26□□□□□ -1.41
APP-213ENST00000464867 LRTM2Q8N967 370 aa6.26□□□□□ -1.41
APP-213ENST00000464867 OR11H7Q8NGC8 314 aa6.26□□□□□ -1.41
APP-213ENST00000464867 GPR146Q96CH1 333 aa6.26□□□□□ -1.41
APP-213ENST00000464867 PDCD10Q9BUL8 212 aa6.26□□□□□ -1.41
APP-213ENST00000464867 CHAC1Q9BUX1 264 aa6.26□□□□□ -1.41
APP-213ENST00000464867 A8MTW9 85 aa6.25□□□□□ -1.41
APP-213ENST00000464867 SNURFLB1AK76 121 aa6.25□□□□□ -1.41
APP-213ENST00000464867 CRYGDP07320 174 aa6.25□□□□□ -1.41
APP-213ENST00000464867 IGLC1P0CG04 106 aa6.25□□□□□ -1.41
APP-213ENST00000464867 GYPEP15421 78 aa6.25□□□□□ -1.41
APP-213ENST00000464867 ELK1P19419 428 aa6.25□□□□□ -1.41
APP-213ENST00000464867 PSMB9P28065 219 aa6.25□□□□□ -1.41
APP-213ENST00000464867 MEOX2P50222 304 aa6.25□□□□□ -1.41
APP-213ENST00000464867 CNN1P51911 297 aaKnown RBP6.25□□□□□ -1.41
APP-213ENST00000464867 GNGT1P63211 74 aa6.25□□□□□ -1.41
APP-213ENST00000464867 LYPD5Q6UWN5 251 aa6.25□□□□□ -1.41
APP-213ENST00000464867 LINC00612Q8N6U2 182 aa6.25□□□□□ -1.41
APP-213ENST00000464867 BEST4Q8NFU0 473 aa6.25□□□□□ -1.41
APP-213ENST00000464867 RNASE8Q8TDE3 154 aaKnown RBP6.25□□□□□ -1.41
APP-213ENST00000464867 VSIG2Q96IQ7 327 aa6.25□□□□□ -1.41
APP-213ENST00000464867 DPH3P1Q9H4G8 78 aa6.25□□□□□ -1.41
APP-213ENST00000464867 TRGV2A0A075B6R0 118 aa6.24□□□□□ -1.41
APP-213ENST00000464867 A0A0U1RQV1 116 aa6.24□□□□□ -1.41
APP-213ENST00000464867 TMEM235A6NFC5 223 aa6.24□□□□□ -1.41
APP-213ENST00000464867 BOLA2-SMG1P6H3BVE0 249 aa6.24□□□□□ -1.41
APP-213ENST00000464867 SOCS3O14543 225 aa6.24□□□□□ -1.41
APP-213ENST00000464867 PDCD5O14737 125 aa6.24□□□□□ -1.41
APP-213ENST00000464867 SLC25A4P12235 298 aa6.24□□□□□ -1.41
APP-213ENST00000464867 PTHLHP12272 177 aa6.24□□□□□ -1.41
APP-213ENST00000464867 S100GP29377 79 aa6.24□□□□□ -1.41
APP-213ENST00000464867 RND2P52198 227 aa6.24□□□□□ -1.41
APP-213ENST00000464867 RHOBP62745 196 aa6.24□□□□□ -1.41
APP-213ENST00000464867 TRAM1Q15629 374 aa6.24□□□□□ -1.41
APP-213ENST00000464867 C1orf194Q5T5A4 169 aa6.24□□□□□ -1.41
APP-213ENST00000464867 OR8I2Q8N0Y5 310 aa6.24□□□□□ -1.41
APP-213ENST00000464867 CCDC197Q8NCU1 140 aa6.24□□□□□ -1.41
APP-213ENST00000464867 SLC24A4Q8NFF2 622 aa6.24□□□□□ -1.41
APP-213ENST00000464867 C9orf16Q9BUW7 83 aa6.24□□□□□ -1.41
APP-213ENST00000464867 PBDC1Q9BVG4 233 aa6.24□□□□□ -1.41
APP-213ENST00000464867 MND1Q9BWT6 205 aa6.24□□□□□ -1.41
APP-213ENST00000464867 INS-IGF2F8WCM5 200 aa6.23□□□□□ -1.41
APP-213ENST00000464867 SCGNO76038 276 aa6.23□□□□□ -1.41
APP-213ENST00000464867 TOMM40O96008 361 aa6.23□□□□□ -1.41
APP-213ENST00000464867 IGLV2-8P01709 118 aa6.23□□□□□ -1.41
APP-213ENST00000464867 RNASE2P10153 161 aaKnown RBP6.23□□□□□ -1.41
APP-213ENST00000464867 SUPT4H1P63272 117 aaKnown RBP6.23□□□□□ -1.41
APP-213ENST00000464867 TDRG1Q3Y452 100 aa6.23□□□□□ -1.41
APP-213ENST00000464867 Q6ZRU5 148 aa6.23□□□□□ -1.41
APP-213ENST00000464867 AHSA2Q719I0 299 aa6.23□□□□□ -1.41
APP-213ENST00000464867 OR51G1Q8NGK1 321 aa6.23□□□□□ -1.41
APP-213ENST00000464867 UFD1Q92890 307 aa6.23□□□□□ -1.41
APP-213ENST00000464867 PPP1R14BQ96C90 147 aa6.23□□□□□ -1.41
APP-213ENST00000464867 RRP15Q9Y3B9 282 aaKnown RBP6.23□□□□□ -1.41
APP-213ENST00000464867 IFITM5A6NNB3 132 aa6.22□□□□□ -1.41
APP-213ENST00000464867 H7BYZ3 331 aa6.22□□□□□ -1.41
APP-213ENST00000464867 SSX5O60225 188 aa6.22□□□□□ -1.41
APP-213ENST00000464867 PSMA1P25786 263 aaKnown RBP6.22□□□□□ -1.41
APP-213ENST00000464867 SPHARQ15513 63 aa6.22□□□□□ -1.41
APP-213ENST00000464867 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
APP-213ENST00000464867 OR8G2PQ6IF36 304 aa6.22□□□□□ -1.41
APP-213ENST00000464867 ETFRF1Q6IPR1 90 aa6.22□□□□□ -1.41
APP-213ENST00000464867 PRSS54Q6PEW0 395 aa6.22□□□□□ -1.41
APP-213ENST00000464867 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
APP-213ENST00000464867 OR52E5Q8NH55 327 aa6.22□□□□□ -1.41
APP-213ENST00000464867 CIRBP-AS1Q8TBR5 109 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms