RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SRSF8Q9BRL6 282 aaKnown RBP5.79□□□□□ -1.48
CLSTN1-204ENST00000464286 ZNF747Q9BV97 191 aa5.79□□□□□ -1.48
CLSTN1-204ENST00000464286 HIGD1BQ9P298 99 aa5.79□□□□□ -1.48
CLSTN1-204ENST00000464286 SMPXQ9UHP9 88 aa5.79□□□□□ -1.48
CLSTN1-204ENST00000464286 LINC00312Q9Y6C7 94 aa5.79□□□□□ -1.48
CLSTN1-204ENST00000464286 HLA-DRB4X5D2U9 266 aa5.79□□□□□ -1.48
CLSTN1-204ENST00000464286 IGKV1OR2-108A0A075B7D4 117 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 LYZL6O75951 148 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 MOSP00540 346 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 LHBP01229 141 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 HBDP02042 147 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 THBDP07204 575 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 CECR9P0C854 216 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 TMEM11P17152 192 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 GLRXP35754 106 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 RANBP2P49792 3224 aaKnown RBP5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 TAL2Q16559 108 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 C3AR1Q16581 482 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 LINC00696Q6ZRV3 163 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 ASCL5Q7RTU5 278 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 NEGR1Q7Z3B1 354 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 Q86TA4 180 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 LINC00311Q8N616 119 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 TEX45Q8NA69 505 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 NPIPB3Q92617 1050 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 ST6GALNAC6Q969X2 333 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 URB1-AS1Q96HZ7 61 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 DCTN5Q9BTE1 182 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 SCNM1Q9BWG6 230 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 SIGLEC8Q9NYZ4 499 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 DKK4Q9UBT3 224 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 PROCRQ9UNN8 238 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 HIGD1AQ9Y241 93 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 ZNF835Q9Y2P0 537 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 TANC2Q9HCD6 1990 aa5.78□□□□□ -1.48
CLSTN1-204ENST00000464286 SDK2Q58EX2 2172 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 A0A087X0K7 114 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 TRAV5A0A0B4J249 113 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 A0A1W2PPM0 123 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 TMEM189A5PLL7 270 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 VSTM5A8MXK1 200 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 IGHG3P01860 377 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 CRYGCP07315 174 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 FTH1P19P0C7X4 201 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 PYYP10082 97 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 BMI1P35226 326 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 LINC00205P59089 165 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 SRSF1Q07955 248 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 PVRIGQ6DKI7 326 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 FAM53AQ6NSI3 398 aaPredicted RBP5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 C16orf54Q6UWD8 224 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNF493Q6ZR52 646 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 BHLHA15Q7RTS1 189 aaPredicted RBP5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 ERASQ7Z444 233 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 MOGAT3Q86VF5 341 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 ORMDL3Q8N138 153 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 CNEP1R1Q8N9A8 125 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 TMEM116Q8NCL8 245 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNF414Q96IQ9 312 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 SLC25A39Q9BZJ4 359 aaPredicted RBP5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 DEFB127Q9H1M4 99 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 VCX2Q9H322 139 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 Q9H3A6 140 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 RPH3ALQ9UNE2 315 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 SPCS1Q9Y6A9 102 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 CNTRLQ7Z7A1 2325 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 CACNA1DQ01668 2161 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 DOCK10Q96BY6 2186 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 PCSK5Q92824 1860 aa5.77□□□□□ -1.49
CLSTN1-204ENST00000464286 TRAV8-6A0A0B4J262 113 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 IGHV3-64DA0A0J9YX35 117 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 PPIAL4DF5H284 164 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 F8W1H4 67 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 TNFRSF1AP19438 455 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 ORM2P19652 201 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 GATA2P23769 480 aaPredicted RBP5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 GUSBP1Q15486 140 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 PATE2Q6UY27 113 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNF788Q6ZQV5 615 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 C2orf91Q6ZV80 131 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 Q6ZVH6 145 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 KIR3DL3Q8N743 410 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 LINC00479Q96M42 142 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 SPRY4Q9C004 299 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 SPRR3Q9UBC9 169 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 LAMA3Q16787 3333 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 TRANK1O15050 2925 aa5.76□□□□□ -1.49
CLSTN1-204ENST00000464286 IGHV1-18A0A0C4DH31 117 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 SH2D7A6NKC9 451 aaPredicted RBP5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 H3BUT2 72 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 K7EM74 188 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNHIT1O43257 154 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 ATP5LO75964 103 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 FSTL3O95633 263 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 GP9P14770 177 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNF137PP52743 207 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 GNG5P63218 68 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms