RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 TMEM126AQ9H061 195 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 ALPK3Q96L96 1907 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 PLXNA4Q9HCM2 1894 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 KDM6AO15550 1401 aaPredicted RBP0.73□□□□□ -2.29
USP9X-204ENST00000463829 FAM159BA6NKW6 160 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 A8MWV9 139 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 NDUFB3O43676 98 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 CTXN2P0C2S0 81 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 PSG9Q00887 426 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 C2orf82Q6UX34 121 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 LINC00322Q6ZN03 302 aaPredicted RBP0.73□□□□□ -2.29
USP9X-204ENST00000463829 PDZD9Q8IXQ8 264 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 STAG3L4Q8TBR4 150 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 IMUPQ9GZP8 106 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 TMEM14CQ9P0S9 112 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 FAM32AQ9Y421 112 aaKnown RBP0.73□□□□□ -2.29
USP9X-204ENST00000463829 MED12Q93074 2177 aa0.73□□□□□ -2.29
USP9X-204ENST00000463829 COL1A1P02452 1464 aaPredicted RBP0.73□□□□□ -2.29
USP9X-204ENST00000463829 ATP5G3P48201 142 aa0.72□□□□□ -2.29
USP9X-204ENST00000463829 TP53RKQ96S44 253 aa0.72□□□□□ -2.29
USP9X-204ENST00000463829 SLC25A21Q9BQT8 299 aaPredicted RBP0.72□□□□□ -2.29
USP9X-204ENST00000463829 TMEM70Q9BUB7 260 aa0.72□□□□□ -2.29
USP9X-204ENST00000463829 ENY2Q9NPA8 101 aa0.72□□□□□ -2.29
USP9X-204ENST00000463829 ORMDL1Q9P0S3 153 aa0.72□□□□□ -2.29
USP9X-204ENST00000463829 ARL2BPQ9Y2Y0 163 aa0.72□□□□□ -2.29
USP9X-204ENST00000463829 ASCC3Q8N3C0 2202 aaKnown RBP0.72□□□□□ -2.29
USP9X-204ENST00000463829 PCF11O94913 1555 aaKnown RBP0.71□□□□□ -2.3
USP9X-204ENST00000463829 IFNA7P01567 189 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 REEP5Q00765 189 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 FADDQ13158 208 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 C4orf22Q6V702 233 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 GOLT1AQ6ZVE7 132 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 GKN2Q86XP6 184 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 SBSPONQ8IVN8 264 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 OR10X1Q8NGY0 326 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 TAS2R7Q9NYW3 318 aa0.71□□□□□ -2.3
USP9X-204ENST00000463829 MYO18AQ92614 2054 aaKnown RBP0.71□□□□□ -2.3
USP9X-204ENST00000463829 CHD3Q12873 2000 aaKnown RBP0.71□□□□□ -2.3
USP9X-204ENST00000463829 ZFC3H1O60293 1989 aaKnown RBP0.7□□□□□ -2.3
USP9X-204ENST00000463829 IGHV1-58A0A0C4DH39 117 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 HMGB3O15347 200 aaKnown RBP0.7□□□□□ -2.3
USP9X-204ENST00000463829 GGCTO75223 188 aaKnown RBP0.7□□□□□ -2.3
USP9X-204ENST00000463829 E2F6O75461 281 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 SERPINA1P01009 418 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 CST2P09228 141 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 CYBAP13498 195 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 UBE2BP63146 152 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 MYL5Q02045 173 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 PLPP5Q8NEB5 264 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 OR10K1Q8NGX5 313 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 LY96Q9Y6Y9 160 aa0.7□□□□□ -2.3
USP9X-204ENST00000463829 ARHGEF11O15085 1522 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 A0A1W2PPM0 123 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 TAX1BP3O14907 124 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 NUPR1O60356 82 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 IFNA6P05013 189 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 S100A6P06703 90 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 EFNA4P52798 201 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 ROMO1P60602 79 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 ZNF833PQ6ZTB9 187 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 OR5D14Q8NGL3 314 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 LINC00052Q96N35 136 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 OPTCQ9UBM4 332 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 PCTPQ9UKL6 214 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 UNC13CQ8NB66 2214 aa0.69□□□□□ -2.3
USP9X-204ENST00000463829 UBR2Q8IWV8 1755 aa0.68□□□□□ -2.3
USP9X-204ENST00000463829 TLCD2A6NGC4 264 aa0.68□□□□□ -2.3
USP9X-204ENST00000463829 CST8O60676 142 aa0.68□□□□□ -2.3
USP9X-204ENST00000463829 TAF1AQ15573 450 aaPredicted RBP0.68□□□□□ -2.3
USP9X-204ENST00000463829 CANT1Q8WVQ1 401 aa0.68□□□□□ -2.3
USP9X-204ENST00000463829 C9orf16Q9BUW7 83 aa0.68□□□□□ -2.3
USP9X-204ENST00000463829 TRAV10A0A0B4J240 114 aa0.67□□□□□ -2.3
USP9X-204ENST00000463829 E7EUB6 86 aa0.67□□□□□ -2.3
USP9X-204ENST00000463829 CD2P06729 351 aa0.67□□□□□ -2.3
USP9X-204ENST00000463829 DSCR4P56555 118 aaPredicted RBP0.67□□□□□ -2.3
USP9X-204ENST00000463829 HSPE1P61604 102 aaKnown RBP0.67□□□□□ -2.3
USP9X-204ENST00000463829 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
USP9X-204ENST00000463829 TNFSF18Q9UNG2 199 aa0.67□□□□□ -2.3
USP9X-204ENST00000463829 DOCK4Q8N1I0 1966 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 SIP14410 1827 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 NUP98P52948 1817 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 IGLV3-32A0A0A0MS00 114 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 TMEM210A6NLX4 147 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 TMEM256-PLSCR3K7ERE1 68 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 KLF7O75840 302 aaPredicted RBP0.66□□□□□ -2.3
USP9X-204ENST00000463829 EIF5AL1Q6IS14 154 aaKnown RBP0.66□□□□□ -2.3
USP9X-204ENST00000463829 HAGHLQ6PII5 290 aaPredicted RBP0.66□□□□□ -2.3
USP9X-204ENST00000463829 TEX37Q96LM6 180 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 ARMC1Q9NVT9 282 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 CAMSAP1Q5T5Y3 1602 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 MYLKQ15746 1914 aa0.66□□□□□ -2.3
USP9X-204ENST00000463829 MIA2Q96PC5 1412 aa0.65□□□□□ -2.3
USP9X-204ENST00000463829 C17orf112F2Z3M2 114 aa0.65□□□□□ -2.31
USP9X-204ENST00000463829 M0R378 163 aa0.65□□□□□ -2.31
USP9X-204ENST00000463829 ERC2-IT1O76042 136 aa0.65□□□□□ -2.31
USP9X-204ENST00000463829 DYNLT3P51808 116 aa0.65□□□□□ -2.31
USP9X-204ENST00000463829 GRINAQ7Z429 371 aa0.65□□□□□ -2.31
USP9X-204ENST00000463829 TEN1Q86WV5 123 aa0.65□□□□□ -2.31
USP9X-204ENST00000463829 ZNF431Q8TF32 576 aaPredicted RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 250.9 ms