RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 THAP8Q8NA92 274 aa17.03■□□□□ 0.32
SSNA1-203ENST00000463511 RARRES2Q99969 163 aa17.03■□□□□ 0.32
SSNA1-203ENST00000463511 CSTL1Q9H114 145 aa17.03■□□□□ 0.32
SSNA1-203ENST00000463511 ZFAND3Q9H8U3 227 aa17.03■□□□□ 0.32
SSNA1-203ENST00000463511 PUS1Q9Y606 427 aaKnown RBP eCLIP17.03■□□□□ 0.32
SSNA1-203ENST00000463511 VPS13DQ5THJ4 4388 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 IGKV3-7A0A075B6H7 116 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 TRAV14DV4A0A0A6YYC5 116 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 IGHV7-4-1A0A0J9YVY3 117 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 SCGB2A1O75556 95 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 YIF1AO95070 293 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 GIPP09681 153 aaPredicted RBP17.02■□□□□ 0.32
SSNA1-203ENST00000463511 SULT1A1P50225 295 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 RHPN1-AS1Q9BWJ2 59 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 FBXL17Q9UF56 701 aa17.02■□□□□ 0.32
SSNA1-203ENST00000463511 HERC2O95714 4834 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 ZFP92A6NM28 416 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 FNDC10F2Z333 226 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 CHEK1O14757 476 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 TMEM144Q7Z5S9 345 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 GATAD1Q8WUU5 269 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 CHAC2Q8WUX2 184 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 ASB13Q8WXK3 278 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 TRGV9Q99603 122 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 HECTD4Q9Y4D8 3996 aa17.01■□□□□ 0.31
SSNA1-203ENST00000463511 TOMM40O96008 361 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 PET100P0DJ07 73 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 ZNF90Q03938 601 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 AKR1C1Q04828 323 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 SLC38A11Q08AI6 406 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 Q8WTZ3 238 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 GGACTQ9BVM4 153 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 MBD2Q9UBB5 411 aa17■□□□□ 0.31
SSNA1-203ENST00000463511 SMCO3A2RU48 225 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 RAP2BP61225 183 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 NHLH2Q02577 135 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 Q5BKY6 102 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 GBGT1Q8N5D6 347 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 OR11H2Q8NH07 326 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 C11orf45Q8TAV5 145 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 SLC25A31Q9H0C2 315 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 C11orf68Q9H3H3 251 aaKnown RBP16.99■□□□□ 0.31
SSNA1-203ENST00000463511 NPVFQ9HCQ7 196 aa16.99■□□□□ 0.31
SSNA1-203ENST00000463511 IGHV3OR16-13A0A075B7E8 117 aa16.98■□□□□ 0.31
SSNA1-203ENST00000463511 IGHV3-74A0A0B4J1X5 117 aa16.98■□□□□ 0.31
SSNA1-203ENST00000463511 RD3LP0DJH9 198 aa16.98■□□□□ 0.31
SSNA1-203ENST00000463511 PSG1P11464 419 aa16.98■□□□□ 0.31
SSNA1-203ENST00000463511 STX12Q86Y82 276 aa16.98■□□□□ 0.31
SSNA1-203ENST00000463511 MFFQ9GZY8 342 aa16.98■□□□□ 0.31
SSNA1-203ENST00000463511 S100A11P31949 105 aa16.97■□□□□ 0.31
SSNA1-203ENST00000463511 CMC4P56277 68 aaPredicted RBP16.97■□□□□ 0.31
SSNA1-203ENST00000463511 THAP6Q8TBB0 222 aa16.97■□□□□ 0.31
SSNA1-203ENST00000463511 DNAH6Q9C0G6 4158 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 DEFB4AO15263 64 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 HBG1P69891 147 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 HBG2P69892 147 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 PRR20EP86478 221 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 PRR20CP86479 221 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 PRR20DP86480 221 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 PRR20BP86481 221 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 PRR20AP86496 221 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 OR2F1Q13607 317 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 VWC2Q2TAL6 325 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 GINS3Q9BRX5 216 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 AGRNO00468 2067 aa16.96■□□□□ 0.31
SSNA1-203ENST00000463511 CA1P00915 261 aaPredicted RBP16.95■□□□□ 0.3
SSNA1-203ENST00000463511 FGL1Q08830 312 aa16.95■□□□□ 0.3
SSNA1-203ENST00000463511 ATP6V1FQ16864 119 aa16.95■□□□□ 0.3
SSNA1-203ENST00000463511 FAM90A2PQ658T7 463 aa16.95■□□□□ 0.3
SSNA1-203ENST00000463511 TMEM182Q6ZP80 229 aaPredicted RBP16.95■□□□□ 0.3
SSNA1-203ENST00000463511 OR51G1Q8NGK1 321 aa16.95■□□□□ 0.3
SSNA1-203ENST00000463511 IL4P05112 153 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 FABP1P07148 127 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 RPL12P30050 165 aaKnown RBP16.94■□□□□ 0.3
SSNA1-203ENST00000463511 BAXQ07812 192 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 USF2Q15853 346 aaPredicted RBP16.94■□□□□ 0.3
SSNA1-203ENST00000463511 TEPPQ6URK8 271 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 TCF24Q7RTU0 167 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 LILRB2Q8N423 598 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 OR2T35Q8NGX2 323 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 TMEM147Q9BVK8 224 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 UQCC1Q9NVA1 299 aa16.94■□□□□ 0.3
SSNA1-203ENST00000463511 G3V3Q6 166 aa16.93■□□□□ 0.3
SSNA1-203ENST00000463511 APOHP02749 345 aaPredicted RBP16.93■□□□□ 0.3
SSNA1-203ENST00000463511 CYP2G1PQ6ZSU1 146 aa16.93■□□□□ 0.3
SSNA1-203ENST00000463511 OR5C1Q8NGR4 320 aa16.93■□□□□ 0.3
SSNA1-203ENST00000463511 C2CD4CQ8TF44 421 aa16.93■□□□□ 0.3
SSNA1-203ENST00000463511 HSPB11Q9Y547 144 aa16.93■□□□□ 0.3
SSNA1-203ENST00000463511 NPPCP23582 126 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 GATA2P23769 480 aaPredicted RBP16.92■□□□□ 0.3
SSNA1-203ENST00000463511 CRYBB3P26998 211 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 PAFAH1B2P68402 229 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 LEMD1Q68G75 181 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 ST8SIA2Q92186 375 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 METTL26Q96S19 204 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 WDR83OSQ9Y284 106 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 U3KQE9 123 aa16.92■□□□□ 0.3
SSNA1-203ENST00000463511 RNF125Q96EQ8 232 aa16.91■□□□□ 0.3
SSNA1-203ENST00000463511 MGST2Q99735 147 aa16.91■□□□□ 0.3
SSNA1-203ENST00000463511 MS4A6AQ9H2W1 248 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms