RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 Q6ZTI0 123 aa2.05□□□□□ -2.08
VRK2-208ENST00000463222 CLVS1Q8IUQ0 354 aaPredicted RBP2.05□□□□□ -2.08
VRK2-208ENST00000463222 Q8NDZ9 215 aa2.05□□□□□ -2.08
VRK2-208ENST00000463222 RNASE11Q8TAA1 199 aaKnown RBP2.05□□□□□ -2.08
VRK2-208ENST00000463222 SLC25A40Q8TBP6 338 aa2.05□□□□□ -2.08
VRK2-208ENST00000463222 CHST6Q9GZX3 395 aa2.05□□□□□ -2.08
VRK2-208ENST00000463222 SAMHD1Q9Y3Z3 626 aaKnown RBP2.05□□□□□ -2.08
VRK2-208ENST00000463222 ARFGEF2Q9Y6D5 1785 aa2.05□□□□□ -2.08
VRK2-208ENST00000463222 KIAA2026Q5HYC2 2103 aa2.05□□□□□ -2.08
VRK2-208ENST00000463222 ZFHX2Q9C0A1 2572 aaPredicted RBP2.04□□□□□ -2.08
VRK2-208ENST00000463222 IGLV3-9A0A075B6K5 115 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 LRRC37AA6NMS7 1700 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 ZNF609O15014 1411 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 CIAO1O76071 339 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 IFNA10P01566 189 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 C8GP07360 202 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 TRGC1P0CF51 173 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 G0S2P27469 103 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 AFDNP55196 1824 aaKnown RBP2.04□□□□□ -2.08
VRK2-208ENST00000463222 CDC42P60953 191 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 VIRMAQ69YN4 1812 aaKnown RBP2.04□□□□□ -2.08
VRK2-208ENST00000463222 N4BP2Q86UW6 1770 aaPredicted RBP2.04□□□□□ -2.08
VRK2-208ENST00000463222 TIAM2Q8IVF5 1701 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 C12orf45Q8N5I9 185 aaPredicted RBP2.04□□□□□ -2.08
VRK2-208ENST00000463222 SPACA4Q8TDM5 124 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 DCANP1Q8TF63 244 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
VRK2-208ENST00000463222 RASSF5Q8WWW0 418 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 SLC7A6Q92536 515 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 AP3S1Q92572 193 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 C20orf27Q9GZN8 174 aa2.04□□□□□ -2.08
VRK2-208ENST00000463222 FER1L6Q2WGJ9 1857 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 BAHCC1Q9P281 2608 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 HMGB3O15347 200 aaKnown RBP2.03□□□□□ -2.08
VRK2-208ENST00000463222 OR2B3O76000 313 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 OR2J2O76002 312 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 PPIBP23284 216 aaKnown RBP2.03□□□□□ -2.08
VRK2-208ENST00000463222 ERP29P30040 261 aaKnown RBP2.03□□□□□ -2.08
VRK2-208ENST00000463222 RELAQ04206 551 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 OR52R1Q8NGF1 315 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 GNPDA2Q8TDQ7 276 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 DOHHQ9BU89 302 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 SLC39A9Q9NUM3 307 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 DLG5Q8TDM6 1919 aa2.03□□□□□ -2.08
VRK2-208ENST00000463222 MYH2Q9UKX2 1941 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 TRBV10-2A0A0K0K1G8 114 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 ZNF705FA8MVS1 300 aaPredicted RBP2.02□□□□□ -2.09
VRK2-208ENST00000463222 CLDN25C9JDP6 229 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 S1PR2O95136 353 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 OR5F1O95221 314 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 G6PCP35575 357 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 GNG10P50151 68 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 ZNF80P51504 273 aaPredicted RBP2.02□□□□□ -2.09
VRK2-208ENST00000463222 RPL19P84098 196 aaKnown RBP2.02□□□□□ -2.09
VRK2-208ENST00000463222 TMEM155Q4W5P6 130 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 GOLT1AQ6ZVE7 132 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 SLC36A1Q7Z2H8 476 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 TERB2Q8NHR7 220 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 SCGB3A1Q96QR1 104 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 GINS4Q9BRT9 223 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 TMEM106BQ9NUM4 274 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 ERGIC3Q9Y282 383 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 LAMB2P55268 1798 aa2.02□□□□□ -2.09
VRK2-208ENST00000463222 MYH3P11055 1940 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 SBF1O95248 1867 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 RTL9Q8NET4 1388 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 ANKRD36CQ5JPF3 1778 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 DDX60Q8IY21 1712 aaKnown RBP2.01□□□□□ -2.09
VRK2-208ENST00000463222 MEIS3P1A6NDR6 274 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 OR51F1A6NGY5 319 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 C1orf196B1AJZ1 125 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 TMEM238C9JI98 176 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 NFYAP23511 347 aaPredicted RBP2.01□□□□□ -2.09
VRK2-208ENST00000463222 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 TMEM86AQ8N2M4 240 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 OR11H6Q8NGC7 330 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 HIVEP2P31629 2446 aa2.01□□□□□ -2.09
VRK2-208ENST00000463222 ICE1Q9Y2F5 2266 aa2□□□□□ -2.09
VRK2-208ENST00000463222 TRAPPC13A5PLN9 417 aa2□□□□□ -2.09
VRK2-208ENST00000463222 ORC5O43913 435 aa2□□□□□ -2.09
VRK2-208ENST00000463222 ATG12O94817 140 aa2□□□□□ -2.09
VRK2-208ENST00000463222 CLPSP04118 112 aa2□□□□□ -2.09
VRK2-208ENST00000463222 IGKV1-16P04430 117 aa2□□□□□ -2.09
VRK2-208ENST00000463222 S100A4P26447 101 aaKnown RBP2□□□□□ -2.09
VRK2-208ENST00000463222 RHOBP62745 196 aa2□□□□□ -2.09
VRK2-208ENST00000463222 Q6Q795 121 aa2□□□□□ -2.09
VRK2-208ENST00000463222 MIR17HGQ75NE6 70 aa2□□□□□ -2.09
VRK2-208ENST00000463222 PFN4Q8NHR9 129 aa2□□□□□ -2.09
VRK2-208ENST00000463222 TMEM106AQ96A25 262 aa2□□□□□ -2.09
VRK2-208ENST00000463222 HOPXQ9BPY8 73 aaPredicted RBP2□□□□□ -2.09
VRK2-208ENST00000463222 HSPB9Q9BQS6 159 aa2□□□□□ -2.09
VRK2-208ENST00000463222 GID8Q9NWU2 228 aa2□□□□□ -2.09
VRK2-208ENST00000463222 TVP23BQ9NYZ1 205 aa2□□□□□ -2.09
VRK2-208ENST00000463222 UTP11Q9Y3A2 253 aaKnown RBP2□□□□□ -2.09
VRK2-208ENST00000463222 NUP210LQ5VU65 1888 aa2□□□□□ -2.09
VRK2-208ENST00000463222 SZT2Q5T011 3432 aa2□□□□□ -2.09
VRK2-208ENST00000463222 MUC3AQ02505 3323 aa2□□□□□ -2.09
VRK2-208ENST00000463222 TNRC18O15417 2968 aaPredicted RBP2□□□□□ -2.09
VRK2-208ENST00000463222 SSC5DA1L4H1 1573 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms