RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 BTBD17A6NE02 478 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 ZNF705EA8MWA4 302 aaPredicted RBP5.69□□□□□ -1.5
UBE4B-204ENST00000462658 C17orf112F2Z3M2 114 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 M0QZK8 103 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 MPDU1O75352 247 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 IGHV4-59P01825 116 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 CRYGCP07315 174 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 NMBP08949 121 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 DEFA4P12838 97 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 SRP14P37108 136 aaKnown RBP5.69□□□□□ -1.5
UBE4B-204ENST00000462658 OPRK1P41145 380 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 RAB5CP51148 216 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 MFAP2P55001 183 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 AKR1C1Q04828 323 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 GAMTQ14353 236 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 ETFRF1Q6IPR1 90 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 TMEM182Q6ZP80 229 aaPredicted RBP5.69□□□□□ -1.5
UBE4B-204ENST00000462658 C19orf35Q6ZS72 473 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 IL17RELQ6ZVW7 336 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 TTC9CQ8N5M4 171 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 ZNF709Q8N972 641 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 LFNGQ8NES3 379 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 OR1L6Q8NGR2 347 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 SGMS2Q8NHU3 365 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 SAT2Q96F10 170 aaPredicted RBP5.69□□□□□ -1.5
UBE4B-204ENST00000462658 SLC35E1Q96K37 410 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 PSMG3Q9BT73 122 aaPredicted RBP5.69□□□□□ -1.5
UBE4B-204ENST00000462658 PARP11Q9NR21 331 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 FBXO7Q9Y3I1 522 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 TIMM9Q9Y5J7 89 aa5.69□□□□□ -1.5
UBE4B-204ENST00000462658 UMAD1C9J7I0 102 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 TRIM77I1YAP6 450 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 CORTO00230 105 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 ATP6V0E1O15342 81 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 TSPAN9O75954 239 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 PRH1P02810 166 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 MFAP4P55083 255 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 SERF2P84101 59 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 UBE2V1Q13404 147 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 RAB31Q13636 194 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 C9orf152Q5JTZ5 239 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 AKR1C8PQ5T2L2 129 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 UNQ5815/PRO19632Q6UWF5 114 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 Q75L30 129 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 SLC16A13Q7RTY0 426 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 TMEM144Q7Z5S9 345 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 CENPVQ7Z7K6 275 aaPredicted RBP5.68□□□□□ -1.5
UBE4B-204ENST00000462658 SLC7A5P1Q8MH63 180 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 OR5T1Q8NG75 326 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 OR2T6Q8NHC8 308 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 CXorf58Q96LI9 332 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 NPCDR1Q9BY65 106 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 FNDC4Q9H6D8 234 aaPredicted RBP5.68□□□□□ -1.5
UBE4B-204ENST00000462658 TNFRSF19Q9NS68 423 aa5.68□□□□□ -1.5
UBE4B-204ENST00000462658 IGHV3-21A0A0B4J1V1 117 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 LINC00862A6NCI5 91 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 AGPAT2O15120 278 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 PLXNB1O43157 2135 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 CYB5BO43169 146 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 MT-CO2P00403 227 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 IGHV3-48P01763 117 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 IGHG2P01859 326 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 HNF1AP20823 631 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 CAMLGP49069 296 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 BLCAPP62952 87 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 ECSCRQ19T08 205 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 AKIRIN2Q53H80 203 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 FFAR4Q5NUL3 377 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 Q6ZRG5 221 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 SIGLECL1Q8N7X8 197 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 FAM213BQ8TBF2 198 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 ACY3Q96HD9 319 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 MGST2Q99735 147 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 HRH4Q9H3N8 390 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 VSIRQ9H7M9 311 aa5.67□□□□□ -1.5
UBE4B-204ENST00000462658 IGLV11-55A0A075B6I3 123 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 TRAV41A0A0B4J266 112 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 G3V318 75 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 I3L2K1 104 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 SOX15O60248 233 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 MBP02144 154 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 IGF1P05019 195 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 HIST1H1BP16401 226 aaKnown RBP5.66□□□□□ -1.5
UBE4B-204ENST00000462658 S100A1P23297 94 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 OR10J1P30954 320 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 RPL29P47914 159 aaKnown RBP5.66□□□□□ -1.5
UBE4B-204ENST00000462658 FHITP49789 147 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 RND2P52198 227 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 CRIP2P52943 208 aaPredicted RBP5.66□□□□□ -1.5
UBE4B-204ENST00000462658 ZNF616Q08AN1 781 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 ACOT6Q3I5F7 207 aaPredicted RBP5.66□□□□□ -1.5
UBE4B-204ENST00000462658 TMEM41BQ5BJD5 291 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 MIC13Q5XKP0 118 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 DPPA3Q6W0C5 159 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 Q71RC1 249 aaPredicted RBP5.66□□□□□ -1.5
UBE4B-204ENST00000462658 SLC35E3Q7Z769 313 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 SMIM29Q86T20 159 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 GGTLC1Q9BX51 225 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 KCNIP2Q9NS61 270 aa5.66□□□□□ -1.5
UBE4B-204ENST00000462658 RPRMQ9NS64 109 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms