RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 DHRS9Q9BPW9 319 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 SHANK2-AS3Q9BTD1 123 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 PDCD10Q9BUL8 212 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 TTTY12Q9BZ98 90 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 CHST6Q9GZX3 395 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 PROK2Q9HC23 129 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 TAS2R4Q9NYW5 299 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 GLS2Q9UI32 602 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 C14orf166Q9Y224 244 aaKnown RBP2.19□□□□□ -2.06
VPS41-210ENST00000462429 MPC1Q9Y5U8 109 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 ALG5Q9Y673 324 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 LHFPL6Q9Y693 200 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 V9GYS6 101 aa2.19□□□□□ -2.06
VPS41-210ENST00000462429 YLPM1P49750 1951 aaKnown RBP2.19□□□□□ -2.06
VPS41-210ENST00000462429 EXPH5Q8NEV8 1989 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 TECTAO75443 2155 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 IGHV3-15A0A0B4J1V0 119 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 IGKV1D-43A0A0B4J1Z2 117 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 A0A1B0GTI1 187 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 A6NIN4 97 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 ARGFXA6NJG6 315 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 TMEM14DPA8MWL7 114 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 F5H5P2 479 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 TRAPPC2LH3BP13 241 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 MKRN2OSH3BPM6 223 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 M0R233 179 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 NOS1APO75052 506 aaPredicted RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 IGLV3-1P01715 115 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 HLA-AP01891 365 aaKnown RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 CD3DP04234 171 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 SULT1A3P0DMM9 295 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 SULT1A4P0DMN0 295 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 CD79AP11912 226 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 HIST1H1DP16402 221 aaKnown RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 BLVRBP30043 206 aaPredicted RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 AP2S1P53680 142 aaPredicted RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 PSG4Q00888 419 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 IL15RAQ13261 267 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 ENDOGQ14249 297 aaKnown RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 SMCO1Q147U7 214 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 OR8B8Q15620 311 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 TBC1D28Q2M2D7 210 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 SCGB2B2Q4G0G5 96 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 ELP2Q6IA86 826 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 TRAPPC6BQ86SZ2 158 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 C17orf78Q8N4C9 275 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 C12orf45Q8N5I9 185 aaPredicted RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 TMEM251Q8N6I4 163 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 ZIC4Q8N9L1 334 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 ACBD4Q8NC06 268 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 OR5A2Q8NGI9 324 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 OR4C16Q8NGL9 310 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 OR2T35Q8NGX2 323 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 OR10AC1Q8NH08 325 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 OR4K15Q8NH41 348 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 ADAT3Q96EY9 351 aaPredicted RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 AMELYQ99218 206 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 CMSS1Q9BQ75 279 aaKnown RBP2.18□□□□□ -2.06
VPS41-210ENST00000462429 FAAP24Q9BTP7 215 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 SUCNR1Q9BXA5 334 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 BCL2L14Q9BZR8 327 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 OR2H1Q9GZK4 316 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 CACFD1Q9UGQ2 172 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 HSPB11Q9Y547 144 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 PCNX2A6NKB5 2137 aa2.18□□□□□ -2.06
VPS41-210ENST00000462429 ALPK2Q86TB3 2170 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 ZDBF2Q9HCK1 2354 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 MEIKINA0A087WXM9 373 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 KANTRA0A1W2PQU2 76 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 C5orf49A4QMS7 147 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 TMEM235A6NFC5 223 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 RFPL4AA6NLU0 287 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 TMEM210A6NLX4 147 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 C17orf51A8MQB3 221 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 MCRIP1C9JLW8 97 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 RFPL4AL1F8VTS6 287 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 H3BSH0 61 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 TOR1AO14656 332 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 ATG12O94817 140 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 PFN1P07737 140 aaKnown RBP2.17□□□□□ -2.06
VPS41-210ENST00000462429 OR4E1P0C645 316 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 CECR9P0C854 216 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 SLC2A1P11166 492 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 PVALBP20472 110 aaPredicted RBP2.17□□□□□ -2.06
VPS41-210ENST00000462429 CRYGSP22914 178 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 CD34P28906 385 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 S100A11P31949 105 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 GNG3P63215 75 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 QRFPP83859 136 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 FAM3AP98173 230 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 BAXQ07812 192 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 OR2F1Q13607 317 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 ZNF345Q14585 488 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 MPV17LQ2QL34 196 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 PABPC1L2AQ5JQF8 200 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 LDLRAD2Q5SZI1 272 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 FAM104BQ5XKR9 115 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 TMEM42Q69YG0 159 aa2.17□□□□□ -2.06
VPS41-210ENST00000462429 TMED4Q7Z7H5 227 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms