RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SSSCA1O60232 199 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 CCNKO75909 580 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 MPC2O95563 127 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 IGHV3-48P01763 117 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 CD5P06127 495 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 OR10J1P30954 320 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 RAB11AP62491 216 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 RPP30P78346 268 aaKnown RBP4.28□□□□□ -1.72
VPS36-202ENST00000462289 USF2Q15853 346 aaPredicted RBP4.28□□□□□ -1.72
VPS36-202ENST00000462289 OR8G2PQ6IF36 304 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 ACOT7LQ6ZUV0 252 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 TMEM61Q8N0U2 210 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 TMEM252Q8N6L7 170 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 PPP1R1CQ8WVI7 109 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 GLMPQ8WWB7 406 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 NPIPB3Q92617 1050 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 PINX1Q96BK5 328 aaKnown RBP4.28□□□□□ -1.72
VPS36-202ENST00000462289 C17orf77Q96MU5 243 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 PSENENQ9NZ42 101 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 PUS1Q9Y606 427 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS36-202ENST00000462289 TRAV14DV4A0A0A6YYC5 116 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 IGSF23A1L1A6 192 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 E5RGE8 158 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 H3BP45 60 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 GOSR2O14653 212 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 BUB3O43684 328 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 SAP30O75446 220 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 SIX6O95475 246 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 CFDP00746 253 aaPredicted RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 IFNA4P05014 189 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 GIPP09681 153 aaPredicted RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 METTL15P1P0C7V9 234 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 PSG1P11464 419 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 GP9P14770 177 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 P2RY1P47900 373 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 SULT1A1P50225 295 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 RRAS2P62070 204 aaPredicted RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 DEFA6Q01524 100 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 BAXQ07812 192 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 FCN2Q15485 313 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 TIGITQ495A1 244 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 Q56UQ5 140 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 SPANXN5Q5MJ07 72 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 C1orf194Q5T5A4 169 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 LCN12Q6JVE5 192 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 TMEM182Q6ZP80 229 aaPredicted RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 UXS1Q8NBZ7 420 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 OR51G1Q8NGK1 321 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 SPAG8Q99932 426 aaPredicted RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 GINS3Q9BRX5 216 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 PARD6GQ9BYG4 376 aaPredicted RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 SEPSECSQ9HD40 501 aaKnown RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 OR5AC2Q9NZP5 309 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 WDR83OSQ9Y284 106 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 TMA7Q9Y2S6 64 aaKnown RBP4.27□□□□□ -1.73
VPS36-202ENST00000462289 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
VPS36-202ENST00000462289 CSMD3Q7Z407 3707 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 IGHV3-35A0A0C4DH35 117 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 C5orf51A6NDU8 294 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 FAM24AA6NFZ4 105 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 SOCS3O14543 225 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 MRPS12O15235 138 aaKnown RBP4.26□□□□□ -1.73
VPS36-202ENST00000462289 APOHP02749 345 aaPredicted RBP4.26□□□□□ -1.73
VPS36-202ENST00000462289 LINC00869P0C866 280 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 RD3LP0DJH9 198 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 S100A11P31949 105 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 SELENOTP62341 195 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 ZNF90Q03938 601 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 PXDC1Q5TGL8 231 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 C16orf54Q6UWD8 224 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 UBAC2Q8NBM4 344 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 OR10P1Q8NGE3 313 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 DCANP1Q8TF63 244 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 RNF125Q96EQ8 232 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 SLC35E1Q96K37 410 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 RNF2Q99496 336 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 NEURL2Q9BR09 285 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 RHPN1-AS1Q9BWJ2 59 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 KRTAP1-5Q9BYS1 174 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 NPVFQ9HCQ7 196 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 GSKIPQ9P0R6 139 aa4.26□□□□□ -1.73
VPS36-202ENST00000462289 A8MTW9 85 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 K7EQG2 157 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 TRIAP1O43715 76 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 MPDU1O75352 247 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 SCGB2A1O75556 95 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 PVALBP20472 110 aaPredicted RBP4.25□□□□□ -1.73
VPS36-202ENST00000462289 RPL29P47914 159 aaKnown RBP4.25□□□□□ -1.73
VPS36-202ENST00000462289 EIF2B2P49770 351 aaKnown RBP4.25□□□□□ -1.73
VPS36-202ENST00000462289 EWSR1Q01844 656 aaKnown RBP eCLIP4.25□□□□□ -1.73
VPS36-202ENST00000462289 SLC38A11Q08AI6 406 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 ATP6V1FQ16864 119 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 ODF3L2Q3SX64 289 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 Q5BKY6 102 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 BTNL8Q6UX41 500 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 PATE2Q6UY27 113 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 Q8WTZ3 238 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 ACY3Q96HD9 319 aa4.25□□□□□ -1.73
VPS36-202ENST00000462289 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms