RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 BET1LQ9NYM9 111 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 POMPQ9Y244 141 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 ARL2BPQ9Y2Y0 163 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 IGHV3OR16-8A0A075B7F1 116 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 SNTNA6NMZ2 147 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 A8MU10 97 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 FABP7O15540 132 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 DCTN3O75935 186 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 REG1AP05451 166 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 TFPI2P48307 235 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 ETV1P50549 477 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 PSMD7P51665 324 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 RPL8P62917 257 aaKnown RBP3.22□□□□□ -1.89
COPS3-204ENST00000462236 FLOT2Q14254 428 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 POU2AF1Q16633 256 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 Q6ZS49 121 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 SH2D6Q7Z4S9 175 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 SPATA24Q86W54 205 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 C15orf53Q8NAA6 179 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 VSTM2AQ8TAG5 236 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 APH1BQ8WW43 257 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 FRZBQ92765 325 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 PECRQ9BY49 303 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 MS4A6AQ9H2W1 248 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 PPDPFQ9H3Y8 114 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 C12orf4Q9NQ89 552 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 BABAM2Q9NXR7 383 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 CKLFQ9UBR5 152 aa3.22□□□□□ -1.89
COPS3-204ENST00000462236 TMEM189A5PLL7 270 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 NUPL2O15504 423 aaKnown RBP3.21□□□□□ -1.9
COPS3-204ENST00000462236 WBP4O75554 376 aaKnown RBP3.21□□□□□ -1.9
COPS3-204ENST00000462236 HLA-DQB1P01920 261 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 SERPINE2P07093 398 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 SPART-AS1P0CW21 52 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 HLA-GP17693 338 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 DCKP27707 260 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 WT1-ASQ06250 92 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 TTC23Q5W5X9 447 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 ZNF773Q6PK81 442 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 TCF24Q7RTU0 167 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 C15orf54Q8N8G6 183 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 GDPD1Q8N9F7 314 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 DUSP18Q8NEJ0 188 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 OR10J5Q8NHC4 309 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 DCANP1Q8TF63 244 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 CENPNQ96H22 339 aaPredicted RBP3.21□□□□□ -1.9
COPS3-204ENST00000462236 ARHGAP5-AS1Q96IT6 56 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
COPS3-204ENST00000462236 C20orf24Q9BUV8 137 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 C21orf62Q9NYP8 219 aa3.21□□□□□ -1.9
COPS3-204ENST00000462236 RBMX2Q9Y388 322 aaKnown RBP3.21□□□□□ -1.9
COPS3-204ENST00000462236 IGKV3-7A0A075B6H7 116 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 IGKV1D-8A0A087WSZ0 117 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 IGHV3-49A0A0A0MS15 119 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 TRAV14DV4A0A0A6YYC5 116 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 TRAV3A0A0B4J244 114 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 IGKV1D-13A0A0B4J2D9 117 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 SMIM9A6NGZ8 99 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 KNCNA6PVL3 124 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 UPK2O00526 184 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 BET1O15155 118 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 NOL3O60936 208 aaKnown RBP3.2□□□□□ -1.9
COPS3-204ENST00000462236 IGKV1-13P0DP09 117 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 DEFA4P12838 97 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 TAS2R43P59537 309 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 PAFAH1B2P68402 229 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 OR2B11Q5JQS5 317 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 FAM222AQ5U5X8 452 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 UBE2UQ5VVX9 321 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 THOC7Q6I9Y2 204 aaKnown RBP3.2□□□□□ -1.9
COPS3-204ENST00000462236 TMPRSS11AQ6ZMR5 421 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 TMEM17Q86X19 198 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 ZFP41Q8N8Y5 198 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 OR10W1Q8NGF6 305 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 OR4S2Q8NH73 311 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 HSD17B10Q99714 261 aaKnown RBP3.2□□□□□ -1.9
COPS3-204ENST00000462236 NIPSNAP3BQ9BS92 247 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 NXF2Q9GZY0 626 aaKnown RBP3.2□□□□□ -1.9
COPS3-204ENST00000462236 FAM107BQ9H098 131 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 Q9H3A6 140 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 CLEC2DQ9UHP7 191 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 MRPS7Q9Y2R9 242 aaKnown RBP3.2□□□□□ -1.9
COPS3-204ENST00000462236 PRELID3BQ9Y3B1 194 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 LINC00588Q9Y4M8 146 aa3.2□□□□□ -1.9
COPS3-204ENST00000462236 F11RQ9Y624 299 aaKnown RBP3.2□□□□□ -1.9
COPS3-204ENST00000462236 IGHV3OR16-13A0A075B7E8 117 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 IGHV3-21A0A0B4J1V1 117 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 IGHV3-74A0A0B4J1X5 117 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 FAM74A7A6NL05 159 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 H3BMM0 161 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 I3L2K1 104 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 MFNGO00587 321 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 RBFOX2O43251 390 aaKnown RBP eCLIP3.19□□□□□ -1.9
COPS3-204ENST00000462236 SLC22A5O76082 557 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 HRASP01112 189 aa3.19□□□□□ -1.9
COPS3-204ENST00000462236 SMR3BP02814 79 aaPredicted RBP3.19□□□□□ -1.9
COPS3-204ENST00000462236 FGF9P31371 208 aaPredicted RBP3.19□□□□□ -1.9
COPS3-204ENST00000462236 RPL29P47914 159 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms