RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983	PQLC2	Q6ZP29	291 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	LINC00305	Q7Z4B0	112 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	REC114	Q7Z4M0	266 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	C1QL4	Q86Z23	238 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	RPP25L	Q8N5L8	163 aa	Known RBP	11.91	□□□□□ -0.5
C1S-209	ENST00000461983	TMEM190	Q8WZ59	177 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	MARC2	Q969Z3	335 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	RCC1L	Q96I51	464 aa	Known RBP	11.91	□□□□□ -0.5
C1S-209	ENST00000461983	GPR82	Q96P67	336 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	CITED2	Q99967	270 aa	Predicted RBP	11.91	□□□□□ -0.5
C1S-209	ENST00000461983	PEMT	Q9UBM1	199 aa		11.91	□□□□□ -0.5
C1S-209	ENST00000461983	ZNF320	A2RRD8	509 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	CD5	P06127	495 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	TAGLN2	P37802	199 aa	Known RBP	11.9	□□□□□ -0.5
C1S-209	ENST00000461983	MYCNOS	P40205	109 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	FAM74A1	Q5RGS3	127 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	OR11H1	Q8NG94	326 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	SFT2D1	Q8WV19	159 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	TMEM37	Q8WXS4	190 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	RAB24	Q969Q5	203 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	DAZ1	Q9NQZ3	744 aa	Known RBP	11.9	□□□□□ -0.5
C1S-209	ENST00000461983	NF1	P21359	2839 aa		11.9	□□□□□ -0.5
C1S-209	ENST00000461983	ZFHX3	Q15911	3703 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983		M0QZ24	198 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983	MEOX2	P50222	304 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983	SHANK2-AS3	Q9BTD1	123 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983	C20orf24	Q9BUV8	137 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983	ELOVL1	Q9BW60	279 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.89	□□□□□ -0.51
C1S-209	ENST00000461983	ZFAND3	Q9H8U3	227 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983	DOK5	Q9P104	306 aa		11.89	□□□□□ -0.51
C1S-209	ENST00000461983	MAP1LC3B2	A6NCE7	125 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	CCL24	O00175	119 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	IFNA1	P01562	189 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	TRBV12-3	P01733	135 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	STAG3L2	P0CL84	134 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	STAG3L3	P0CL85	134 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	RPL7	P18124	248 aa	Known RBP	11.88	□□□□□ -0.51
C1S-209	ENST00000461983	CRYBB3	P26998	211 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	HOXD3	P31249	432 aa	Predicted RBP	11.88	□□□□□ -0.51
C1S-209	ENST00000461983	PSMB3	P49720	205 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	SRSF2	Q01130	221 aa	Known RBP	11.88	□□□□□ -0.51
C1S-209	ENST00000461983	PMS2P11	Q13670	270 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	KLF5	Q13887	457 aa	Predicted RBP	11.88	□□□□□ -0.51
C1S-209	ENST00000461983	PATE2	Q6UY27	113 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	BPIFA4P	Q86YQ2	179 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	OR4F17	Q8NGA8	305 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	OR4F4	Q96R69	305 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	MAP1LC3B	Q9GZQ8	125 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	VSIR	Q9H7M9	311 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	SEPSECS	Q9HD40	501 aa	Known RBP	11.88	□□□□□ -0.51
C1S-209	ENST00000461983	TMEM167B	Q9NRX6	74 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	RFNG	Q9Y644	331 aa		11.88	□□□□□ -0.51
C1S-209	ENST00000461983	IGHV4OR15-8	A0A075B7B6	117 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983		A0A087WW49	117 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	ZNF98	A6NK75	572 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983		A8MWP6	167 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	NMB	P08949	121 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	USF2	Q15853	346 aa	Predicted RBP	11.87	□□□□□ -0.51
C1S-209	ENST00000461983	NDUFA5	Q16718	116 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	KRTAP24-1	Q3LI83	254 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	GCSAML	Q5JQS6	135 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	PRIMA1	Q86XR5	153 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	C11orf44	Q8N8P7	122 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	CITED1	Q99966	193 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	SLC25A22	Q9H936	323 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	TMEM14C	Q9P0S9	112 aa		11.87	□□□□□ -0.51
C1S-209	ENST00000461983	IGHV3-35	A0A0C4DH35	117 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983		H3BRN7	92 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	FHL3	Q13643	280 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	GUK1	Q16774	197 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	SAMD13	Q5VXD3	122 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	LCN15	Q6UWW0	184 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	C12orf54	Q6X4T0	127 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	IL34	Q6ZMJ4	242 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	C8orf86	Q6ZUL3	223 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	OR8I2	Q8N0Y5	310 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	C3orf56	Q8N813	242 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	LYPD6B	Q8NI32	183 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	ZNF747	Q9BV97	191 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	PLA2G2E	Q9NZK7	142 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983	JMJD1C	Q15652	2540 aa		11.86	□□□□□ -0.51
C1S-209	ENST00000461983		A0A1W2PRX2	142 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	HELT	A6NFD8	242 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	OR7C2	O60412	319 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	GALR1	P47211	349 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	FHIT	P49789	147 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	SHISA2	Q6UWI4	295 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	MIR17HG	Q75NE6	70 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	SUN5	Q8TC36	379 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	TXNDC17	Q9BRA2	123 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	PAXX	Q9BUH6	204 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	NKX6-2	Q9C056	277 aa	Predicted RBP	11.85	□□□□□ -0.51
C1S-209	ENST00000461983	OR51M1	Q9H341	326 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	HRH4	Q9H3N8	390 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	MED9	Q9NWA0	146 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983		U3KQE9	123 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	ARL2-SNX15	V9GYD0	113 aa		11.85	□□□□□ -0.51
C1S-209	ENST00000461983	C2CD3	Q4AC94	2353 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	IGHV7-4-1	A0A0J9YVY3	117 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms