RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CRYGCP07315 174 aa9.92□□□□□ -0.82
COL4A6-204ENST00000461897 COX7A1P24310 79 aa9.92□□□□□ -0.82
COL4A6-204ENST00000461897 PRRX1P54821 245 aa9.92□□□□□ -0.82
COL4A6-204ENST00000461897 TCL1AP56279 114 aa9.92□□□□□ -0.82
COL4A6-204ENST00000461897 ZNF331Q9NQX6 463 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-204ENST00000461897 KLF12Q9Y4X4 402 aa9.92□□□□□ -0.82
COL4A6-204ENST00000461897 CELSR2Q9HCU4 2923 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 ZFP36P26651 326 aaKnown RBP9.91□□□□□ -0.82
COL4A6-204ENST00000461897 ARF6P62330 175 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 SSBP2P81877 361 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-204ENST00000461897 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 MRPL54Q6P161 138 aaKnown RBP9.91□□□□□ -0.82
COL4A6-204ENST00000461897 ATP5L2Q7Z4Y8 100 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 C18orf32Q8TCD1 76 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 TSKUQ8WUA8 353 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 WASHC3Q9Y3C0 194 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 BUB1B-PAK6H3BSN5 160 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 M0R1W7 72 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 SPINK4O60575 86 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 MRGPRG-AS1Q2M3A8 158 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 FAM168AQ92567 244 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 NPIPB3Q92617 1050 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 SVEP1Q4LDE5 3571 aa9.91□□□□□ -0.82
COL4A6-204ENST00000461897 FAM208BQ5VWN6 2430 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 A0A1B0GXF2 115 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 PYYP10082 97 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 MC5RP33032 325 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 KRTDAPP60985 99 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 LMO4P61968 165 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 SLC35B1P78383 322 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 SLAQ13239 276 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 LDLRAD2Q5SZI1 272 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 ETFRF1Q6IPR1 90 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 TRGV9Q99603 122 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 SERTAD4Q9NUC0 356 aa9.9□□□□□ -0.82
COL4A6-204ENST00000461897 CHD6Q8TD26 2715 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 A1L4Q6 167 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 DLEU1O43261 78 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 C3orf79P0CE67 100 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 HIST1H1EP10412 219 aaKnown RBP9.89□□□□□ -0.83
COL4A6-204ENST00000461897 LGALS7P47929 136 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 VMA21Q3ZAQ7 101 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 CT83Q5H943 113 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 HCP5Q6MZN7 132 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 LINC00479Q96M42 142 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 FAM103A1Q9BTL3 118 aaKnown RBP9.89□□□□□ -0.83
COL4A6-204ENST00000461897 IGHV3-72A0A0B4J1Y9 119 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 A0A1W2PPI3 338 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 LY6LH3BQJ8 138 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 CA1P00915 261 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-204ENST00000461897 PMCHP20382 165 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 PLP1P60201 277 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 KLRD1Q13241 179 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 GDF5OSQ5U4N7 250 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 OR11H6Q8NGC7 330 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 TMEM190Q8WZ59 177 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 PERPQ96FX8 193 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 MLST8Q9BVC4 326 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 MRPL36Q9P0J6 103 aaKnown RBP9.89□□□□□ -0.83
COL4A6-204ENST00000461897 UQCR10Q9UDW1 63 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 EPDR1Q9UM22 224 aa9.89□□□□□ -0.83
COL4A6-204ENST00000461897 IGHV1-3A0A0C4DH29 117 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 ENSAO43768 121 aaKnown RBP9.88□□□□□ -0.83
COL4A6-204ENST00000461897 IGLC2P0DOY2 106 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 IGLC3P0DOY3 106 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 ZNF25P17030 456 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-204ENST00000461897 PRTN3P24158 256 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 SPATA45Q537H7 98 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 C10orf55Q5SWW7 151 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 LINC00305Q7Z4B0 112 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 KIR3DL3Q8N743 410 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 TEX45Q8NA69 505 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 NHLRC2Q8NBF2 726 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 TMEM68Q96MH6 324 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 TMEM208Q9BTX3 173 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 PRSS22Q9GZN4 317 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 LPAR2Q9HBW0 351 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 ZNF492Q9P255 531 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 SOX21Q9Y651 276 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-204ENST00000461897 MED13LQ71F56 2210 aa9.88□□□□□ -0.83
COL4A6-204ENST00000461897 IGLC7A0M8Q6 106 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 ODF3BA8MYP8 253 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 MFAP2P55001 183 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 PMCHL1Q16048 86 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 C1orf122Q6ZSJ8 110 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 TMEM116Q8NCL8 245 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 NRGNQ92686 78 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 RITA1Q96K30 269 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 GPR82Q96P67 336 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 RBM14Q96PK6 669 aaKnown RBP9.87□□□□□ -0.83
COL4A6-204ENST00000461897 ALKBH7Q9BT30 221 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-204ENST00000461897 SPG11Q96JI7 2443 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 ABCA2Q9BZC7 2435 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 IGHV2-70DA0A0C4DH43 119 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 C20orf202A1L168 122 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 CRYGBP07316 175 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 COX6B1P14854 86 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms