RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SMLR1H3BR10 107 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 K7EQG2 157 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 GOSR2O14653 212 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 PFDN1O60925 122 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 ADAP1O75689 374 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 IGKV1-17P01599 117 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 HOXB5P09067 269 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 IAPPP10997 89 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 PSG1P11464 419 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 MIFP14174 115 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 LYZP61626 148 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 SAMD13Q5VXD3 122 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 GGNBP1Q5YKI7 109 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 C16orf54Q6UWD8 224 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 OR8I2Q8N0Y5 310 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 LILRB2Q8N423 598 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 C2CD4CQ8TF44 421 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 RNF125Q96EQ8 232 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 LINC00052Q96N35 136 aa6.52□□□□□ -1.37
LDB1-203ENST00000461873 C11orf68Q9H3H3 251 aaKnown RBP6.52□□□□□ -1.37
LDB1-203ENST00000461873 MRPL36Q9P0J6 103 aaKnown RBP6.52□□□□□ -1.37
LDB1-203ENST00000461873 TENM2Q9NT68 2774 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 SMCO3A2RU48 225 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 KNCNA6PVL3 124 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 FAM25EA8MYX2 175 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 C11orf94C9JXX5 98 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 SLC25A6P12236 298 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 TCTAP57738 103 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 AKR1C1Q04828 323 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 SPANXN5Q5MJ07 72 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 OR8G2PQ6IF36 304 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 EBLN2Q6P2I7 272 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 LINC00476Q8WZB0 136 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 RAB40CQ96S21 281 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 LYSTQ99698 3801 aa6.51□□□□□ -1.37
LDB1-203ENST00000461873 SEPSECSQ9HD40 501 aaKnown RBP6.51□□□□□ -1.37
LDB1-203ENST00000461873 STRAPQ9Y3F4 350 aaKnown RBP6.51□□□□□ -1.37
LDB1-203ENST00000461873 C5orf51A6NDU8 294 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 DEFB4AO15263 64 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 BUB3O43684 328 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 SYNGR2O43760 224 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 CCNKO75909 580 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 GALR1P47211 349 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 NANOS2P60321 138 aaKnown RBP6.5□□□□□ -1.37
LDB1-203ENST00000461873 OR2F1Q13607 317 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 GAMTQ14353 236 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 USF2Q15853 346 aaPredicted RBP6.5□□□□□ -1.37
LDB1-203ENST00000461873 C1orf194Q5T5A4 169 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 TRPT1Q86TN4 253 aaKnown RBP6.5□□□□□ -1.37
LDB1-203ENST00000461873 FAM24BQ8N5W8 94 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 BPIFCQ8NFQ6 507 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 DCANP1Q8TF63 244 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 MITD1Q8WV92 249 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 GLMPQ8WWB7 406 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 ST6GAL2Q96JF0 529 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 TMEM147Q9BVK8 224 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 RNF24Q9Y225 148 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 CSMD3Q7Z407 3707 aa6.5□□□□□ -1.37
LDB1-203ENST00000461873 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
LDB1-203ENST00000461873 IGLL5B9A064 214 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 NKX2-1P43699 371 aaPredicted RBP6.49□□□□□ -1.37
LDB1-203ENST00000461873 MEOX2P50222 304 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 RAP2BP61225 183 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 Q5BKY6 102 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 AKAP14Q86UN6 197 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 OR4B1Q8NGF8 309 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 LRRC20Q8TCA0 184 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 C16orf92Q96LL3 132 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 TRGV9Q99603 122 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 MAGT1Q9H0U3 335 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 SLC25A22Q9H936 323 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 PPP1R14DQ9NXH3 145 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 CLEC5AQ9NY25 188 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 GSKIPQ9P0R6 139 aa6.49□□□□□ -1.37
LDB1-203ENST00000461873 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 BOLA2-SMG1P6H3BVE0 249 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 SCGB1D2O95969 90 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 IGKV3-20P01619 116 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 ORM2P19652 201 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 PSMB3P49720 205 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 H2BFSP57053 126 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 ZNF90Q03938 601 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 FGL1Q08830 312 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 SPATA31B1PQ5VZV4 182 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 GSG1LQ6UXU4 331 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 OR1B1Q8NGR6 318 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 GPR82Q96P67 336 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 TMEM208Q9BTX3 173 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 HRH4Q9H3N8 390 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 RPRMQ9NS64 109 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 PSENENQ9NZ42 101 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 XCL2Q9UBD3 114 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 U3KQE9 123 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
LDB1-203ENST00000461873 AGRNO00468 2067 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 TRAV10A0A0B4J240 114 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 IGHV4-28A0A0C4DH34 117 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 TMEM189A5PLL7 270 aa6.47□□□□□ -1.37
LDB1-203ENST00000461873 H3BP45 60 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms