RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TBC1D24Q9ULP9 559 aa11.21□□□□□ -0.61
NUP50-213ENST00000461437 SMCO3A2RU48 225 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 SSSCA1O60232 199 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 SCGB1D2O95969 90 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 IL7P13232 177 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 HLA-DRB4P13762 266 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 HLA-DMBP28068 263 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 AKR1C1Q04828 323 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 Q6ZTC4 211 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 OR4D5Q8NGN0 318 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 DEDD2Q8WXF8 326 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 CIB3Q96Q77 187 aaPredicted RBP11.2□□□□□ -0.62
NUP50-213ENST00000461437 MFFQ9GZY8 342 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 SLC25A32Q9H2D1 315 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 DOK5Q9P104 306 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
NUP50-213ENST00000461437 NAP1L6A6NFF2 107 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 PRB4P10163 310 aaPredicted RBP11.19□□□□□ -0.62
NUP50-213ENST00000461437 MIFP14174 115 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 ORM2P19652 201 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 RRAS2P62070 204 aaPredicted RBP11.19□□□□□ -0.62
NUP50-213ENST00000461437 PRR20EP86478 221 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 PRR20CP86479 221 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 PRR20DP86480 221 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 PRR20BP86481 221 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 PRR20AP86496 221 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 C4orf46Q504U0 113 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 SCRT1Q9BWW7 348 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 PSENENQ9NZ42 101 aa11.19□□□□□ -0.62
NUP50-213ENST00000461437 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
NUP50-213ENST00000461437 IGHV3OR16-12A0A075B7B8 117 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 PIGBOS1A0A0B4J2F0 54 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 IGLL5B9A064 214 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 FABP1P07148 127 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 NKX2-1P43699 371 aaPredicted RBP11.18□□□□□ -0.62
NUP50-213ENST00000461437 ID3Q02535 119 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 TMEM41BQ5BJD5 291 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 IGFL4Q6B9Z1 124 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 COQ8AQ8NI60 647 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 C2CD4CQ8TF44 421 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 SLC35B3Q9H1N7 401 aa11.18□□□□□ -0.62
NUP50-213ENST00000461437 SAV1Q9H4B6 383 aaPredicted RBP11.18□□□□□ -0.62
NUP50-213ENST00000461437 PMS2P5A8MQ11 134 aa11.17□□□□□ -0.62
NUP50-213ENST00000461437 CCSO14618 274 aa11.17□□□□□ -0.62
NUP50-213ENST00000461437 PLA2G10O15496 165 aa11.17□□□□□ -0.62
NUP50-213ENST00000461437 NUP62P37198 522 aaPredicted RBP11.17□□□□□ -0.62
NUP50-213ENST00000461437 PAX9P55771 341 aa11.17□□□□□ -0.62
NUP50-213ENST00000461437 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
NUP50-213ENST00000461437 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
NUP50-213ENST00000461437 ZNF98A6NK75 572 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 METTL15P1P0C7V9 234 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 ID1P41134 155 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 PSMB3P49720 205 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 EMP1P54849 157 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 C1orf194Q5T5A4 169 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 ZNF709Q8N972 641 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 BPIFCQ8NFQ6 507 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 RSG1Q9BU20 258 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 GSKIPQ9P0R6 139 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 PFDN2Q9UHV9 154 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
NUP50-213ENST00000461437 IFNA21P01568 189 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.62
NUP50-213ENST00000461437 IAH1Q2TAA2 248 aaPredicted RBP11.15□□□□□ -0.62
NUP50-213ENST00000461437 C12orf74Q32Q52 190 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 FOXI2Q6ZQN5 318 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 CYP2G1PQ6ZSU1 146 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 ZBTB8BQ8NAP8 495 aaPredicted RBP11.15□□□□□ -0.62
NUP50-213ENST00000461437 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 C20orf85Q9H1P6 137 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
NUP50-213ENST00000461437 TRAV6A0A075B6T7 132 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 CENPXA8MT69 81 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 ZNF705DP0CH99 300 aaPredicted RBP11.14□□□□□ -0.63
NUP50-213ENST00000461437 ZNF705BP0CI00 300 aaPredicted RBP11.14□□□□□ -0.63
NUP50-213ENST00000461437 FGL1Q08830 312 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 ARL16Q0P5N6 197 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 TMEM144Q7Z5S9 345 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 SEC22CQ9BRL7 303 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 TMEM147Q9BVK8 224 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
NUP50-213ENST00000461437 RCL1Q9Y2P8 373 aaKnown RBP11.14□□□□□ -0.63
NUP50-213ENST00000461437 A0A0J9YX75 114 aa11.13□□□□□ -0.63
NUP50-213ENST00000461437 H3BRN7 92 aa11.13□□□□□ -0.63
NUP50-213ENST00000461437 ISLRO14498 428 aa11.13□□□□□ -0.63
NUP50-213ENST00000461437 IL5P05113 134 aa11.13□□□□□ -0.63
NUP50-213ENST00000461437 GALR1P47211 349 aa11.13□□□□□ -0.63
NUP50-213ENST00000461437 SLC38A11Q08AI6 406 aa11.13□□□□□ -0.63
NUP50-213ENST00000461437 TMEM14EPQ6UXP3 125 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms