RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 TRBV20OR9-2A0A075B6H5 130 aa11.15□□□□□ -0.62
ERCC3-205ENST00000460485 SAA4P35542 130 aa11.15□□□□□ -0.62
ERCC3-205ENST00000460485 SNRPEP62304 92 aaKnown RBP11.15□□□□□ -0.62
ERCC3-205ENST00000460485 CX3CL1P78423 397 aa11.15□□□□□ -0.62
ERCC3-205ENST00000460485 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
ERCC3-205ENST00000460485 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
ERCC3-205ENST00000460485 DERL1Q9BUN8 251 aa11.15□□□□□ -0.62
ERCC3-205ENST00000460485 TRBV9A0A0B4J1U6 114 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 NCBP2LA6PVI3 153 aaKnown RBP11.14□□□□□ -0.63
ERCC3-205ENST00000460485 ISLRO14498 428 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 RD3LP0DJH9 198 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 SLC25A16P16260 332 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 ORM2P19652 201 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 CRYBB3P26998 211 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 MYCNOSP40205 109 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 SUMO1P63165 101 aaKnown RBP11.14□□□□□ -0.63
ERCC3-205ENST00000460485 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 LINC00518Q8N0U6 118 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 LYPD1Q8N2G4 141 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 C5orf17Q8NAS9 161 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 OCC1Q8TAD7 63 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 IL36BQ9NZH7 164 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
ERCC3-205ENST00000460485 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 PEX7O00628 323 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 GNG7O60262 68 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 GCGP01275 180 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 PSG1P11464 419 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 GP9P14770 177 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 AKR1D1P51857 326 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 ATP5J2P56134 94 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 PRB3Q04118 309 aaPredicted RBP11.13□□□□□ -0.63
ERCC3-205ENST00000460485 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 ARL6IP6Q8N6S5 226 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 Q8N9W7 124 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 SGMS2Q8NHU3 365 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 IGF2BP2-AS1Q96M15 143 aa11.13□□□□□ -0.63
ERCC3-205ENST00000460485 MRPL27Q9P0M9 148 aaKnown RBP11.13□□□□□ -0.63
ERCC3-205ENST00000460485 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 H3BRN7 92 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 TRGC2P03986 189 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 NBEAP1P0C6P0 100 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H1EP10412 219 aaKnown RBP11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HOXA5P20719 270 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 RAB9AP51151 201 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 LYZP61626 148 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 PDE6HQ13956 83 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 RPEL1Q2QD12 228 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
ERCC3-205ENST00000460485 BPIFA4PQ86YQ2 179 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 LRRC75A-AS1Q8N1F1 130 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 OR4F17Q8NGA8 305 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 ELOVL1Q9BW60 279 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
ERCC3-205ENST00000460485 OTORQ9NRC9 128 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 PITPNC1Q9UKF7 332 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 ZANQ9Y493 2812 aa11.12□□□□□ -0.63
ERCC3-205ENST00000460485 IGHV7-81A0A0B4J1V7 117 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 M0QZK8 103 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 MT-ND6P03923 174 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
ERCC3-205ENST00000460485 UBE2G1P62253 170 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 RNF125Q96EQ8 232 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 FANCD2OSQ96PS1 177 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 KLF12Q9Y4X4 402 aa11.11□□□□□ -0.63
ERCC3-205ENST00000460485 TRAV5A0A0B4J249 113 aa11.1□□□□□ -0.63
ERCC3-205ENST00000460485 TRAV20A0A0B4J274 112 aa11.1□□□□□ -0.63
ERCC3-205ENST00000460485 CENPVL3A0A0U1RRI6 287 aa11.1□□□□□ -0.63
ERCC3-205ENST00000460485 SERTM2A0A1B0GWG4 89 aa11.1□□□□□ -0.63
ERCC3-205ENST00000460485 WI2-2373I1.2A0A1W2PRP0 233 aa11.1□□□□□ -0.63
ERCC3-205ENST00000460485 FBLL1A6NHQ2 334 aaKnown RBP11.1□□□□□ -0.63
ERCC3-205ENST00000460485 PHOX2AO14813 284 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms