RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TSSC4Q9Y5U2 329 aaPredicted RBP8.09□□□□□ -1.11
UFD1-205ENST00000459854 CHCHD2Q9Y6H1 151 aaPredicted RBP8.09□□□□□ -1.11
UFD1-205ENST00000459854 MST1LQ2TV78 715 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 Q6ZS49 121 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 LYPD1Q8N2G4 141 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 GFI1Q99684 422 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 RP1L1Q8IWN7 2480 aaPredicted RBP8.09□□□□□ -1.11
UFD1-205ENST00000459854 TNRC6BQ9UPQ9 1833 aaKnown RBP8.09□□□□□ -1.11
UFD1-205ENST00000459854 TRAV21A0A0B4J279 112 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 TGFAP01135 160 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 HTN1P15515 57 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 SUPT4H1P63272 117 aaKnown RBP8.09□□□□□ -1.11
UFD1-205ENST00000459854 PPP1R27Q86WC6 154 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 PHLDA1Q8WV24 401 aaPredicted RBP8.09□□□□□ -1.11
UFD1-205ENST00000459854 TRACP01848 142 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 NMSQ5H8A3 153 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 TMEM86BQ8N661 226 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 ITLN1Q8WWA0 313 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 GPHA2Q96T91 129 aa8.09□□□□□ -1.11
UFD1-205ENST00000459854 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
UFD1-205ENST00000459854 M0R381 172 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 AGFG2O95081 481 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 SLAQ13239 276 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 SPATA31B1PQ5VZV4 182 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
UFD1-205ENST00000459854 CRIM1Q9NZV1 1036 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 KIF26BQ2KJY2 2108 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 hDV102S1A0JD36 115 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 H3BMM0 161 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 PAQR4Q8N4S7 273 aaPredicted RBP8.08□□□□□ -1.12
UFD1-205ENST00000459854 C8orf46Q8TAG6 207 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 UBE2WQ96B02 151 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 IGHV2OR16-5A0A0B4J2B6 119 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 IGFL3Q6UXB1 125 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 C1orf162Q8NEQ5 155 aaPredicted RBP8.08□□□□□ -1.12
UFD1-205ENST00000459854 C21orf62Q9NYP8 219 aa8.08□□□□□ -1.12
UFD1-205ENST00000459854 NUP214P35658 2090 aaPredicted RBP8.07□□□□□ -1.12
UFD1-205ENST00000459854 COX8AP10176 69 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 ZNF497Q6ZNH5 498 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 NPFFR1Q9GZQ6 430 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 ZNF492Q9P255 531 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 TRBV6-6A0A0A6YYG2 114 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 RAMP3O60896 148 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 RPP25LQ8N5L8 163 aaKnown RBP8.07□□□□□ -1.12
UFD1-205ENST00000459854 TMEM126AQ9H061 195 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 APELAP0DMC3 54 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 Q6ZS92 163 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 FOXA2Q9Y261 457 aaPredicted RBP8.07□□□□□ -1.12
UFD1-205ENST00000459854 LAMA2P24043 3122 aaKnown RBP8.07□□□□□ -1.12
UFD1-205ENST00000459854 KIR2DL5BA0A0G2JN68 375 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 KIR2DL5BA0A0G2JPC4 375 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 A0A1W2PPM0 123 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 LY6DQ14210 128 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 GTSCR1Q86UQ5 136 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 KIR2DL5AQ8N109 375 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 NUP35Q8NFH5 326 aa8.07□□□□□ -1.12
UFD1-205ENST00000459854 MRPS18CQ9Y3D5 142 aaKnown RBP8.07□□□□□ -1.12
UFD1-205ENST00000459854 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
UFD1-205ENST00000459854 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 OR11H6Q8NGC7 330 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 SNRNP200O75643 2136 aaKnown RBP8.06□□□□□ -1.12
UFD1-205ENST00000459854 CFAP161Q6P656 301 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 LYPD3O95274 346 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 TOMM40O96008 361 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 AZU1P20160 251 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 SPSB3Q6PJ21 355 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 CSTL1Q9H114 145 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 VSIRQ9H7M9 311 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 LINC00312Q9Y6C7 94 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 SCN2AQ99250 2005 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 H3BTX0 84 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 CLPSP04118 112 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 ZNF688P0C7X2 276 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 WT1P19544 449 aaPredicted RBP8.06□□□□□ -1.12
UFD1-205ENST00000459854 LGALS9BQ3B8N2 356 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 RPL39P5Q59GN2 51 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 LGALS9CQ6DKI2 356 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 MDS2Q8NDY4 140 aa8.06□□□□□ -1.12
UFD1-205ENST00000459854 OVOL1O14753 267 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 ZNF826PQ6ZT77 177 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 WBP1Q96G27 269 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 CGB1A6NKQ9 187 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 ACYP1P07311 99 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 TMEM258P61165 79 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 LCN12Q6JVE5 192 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 PRR7Q8TB68 274 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 IGKV3-7A0A075B6H7 116 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 IGKV1D-13A0A0B4J2D9 117 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 IGKV1-13P0DP09 117 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 C1QTNF4Q9BXJ3 329 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 FBXL7Q9UJT9 491 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 CACNA1BQ00975 2339 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 TP53BP1Q12888 1972 aaPredicted RBP8.05□□□□□ -1.12
UFD1-205ENST00000459854 IQCF6A8MYZ5 107 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 D6R8Y8 96 aa8.05□□□□□ -1.12
UFD1-205ENST00000459854 DUSP14O95147 198 aaKnown RBP8.05□□□□□ -1.12
UFD1-205ENST00000459854 CRPP02741 224 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms