RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 NEU1Q99519 415 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 PRSS22Q9GZN4 317 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 Q9H3A6 140 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 NRN1Q9NPD7 142 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 TPSG1Q9NRR2 321 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 THYN1Q9P016 225 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 DPM3Q9P2X0 92 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 UQCR10Q9UDW1 63 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 CELSR3Q9NYQ7 3312 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 HEATR1Q9H583 2144 aaKnown RBP7.06□□□□□ -1.28
HDAC3-202ENST00000459727 C19orf71A6NCJ1 209 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 NPIPB6E9PJ23 425 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 I3L2K1 104 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 NBR2O15453 112 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 NUPR1O60356 82 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 NDUFA3O95167 84 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 CNIH1O95406 144 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 MOSP00540 346 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 RPLP1P05386 114 aaKnown RBP7.06□□□□□ -1.28
HDAC3-202ENST00000459727 OR5AL1P0C617 328 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 LYZP61626 148 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 SSBP2P81877 361 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-202ENST00000459727 DIAPH2-AS1Q14236 149 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 MINOS1Q5TGZ0 78 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 Q86TA4 180 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 NHLRC2Q8NBF2 726 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 VN1R17PQ8TDU5 208 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 SHANK2-AS3Q9BTD1 123 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 SLC25A39Q9BZJ4 359 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-202ENST00000459727 C1RLQ9NZP8 487 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 MINOS1-NBL1R4GNA1 71 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 CFAP46Q8IYW2 2715 aa7.06□□□□□ -1.28
HDAC3-202ENST00000459727 A0A1B0GV90 55 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 NPIPB5A8MRT5 1133 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 H3BRN7 92 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 PSG1P11464 419 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 HOXB4P17483 251 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-202ENST00000459727 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-202ENST00000459727 RIGQ13278 110 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 PRR27Q6MZM9 219 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 ZNF705AQ6ZN79 300 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-202ENST00000459727 BLNKQ8WV28 456 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 ALKBH7Q9BT30 221 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-202ENST00000459727 AAMDCQ9H7C9 122 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 CBLN4Q9NTU7 201 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 ONECUT1Q9UBC0 465 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 DOCK11Q5JSL3 2073 aa7.05□□□□□ -1.28
HDAC3-202ENST00000459727 TENM4Q6N022 2769 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 CACNA1DQ01668 2161 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 IGHV3-72A0A0B4J1Y9 119 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 A0A1B0GUS0 222 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 HAX1O00165 279 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 CHEK1O14757 476 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 TCAPO15273 167 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 SPINK4O60575 86 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 CT45A10P0DMU9 189 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 BTF3P20290 206 aaKnown RBP7.04□□□□□ -1.28
HDAC3-202ENST00000459727 PRTN3P24158 256 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 COX7A1P24310 79 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 COL8A1P27658 744 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 CSN1S1P47710 185 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 RAB9AP51151 201 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 MFAP4P55083 255 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 PSG9Q00887 426 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 KLRB1Q12918 225 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 SLAQ13239 276 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 CIARTQ8N365 385 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-202ENST00000459727 GATD1Q8NB37 220 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 TXN2Q99757 166 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 NDFIP1Q9BT67 221 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 SNHG12Q9BXW3 62 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 WNT10AQ9GZT5 417 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 FBXL15Q9H469 300 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 MRPL36Q9P0J6 103 aaKnown RBP7.04□□□□□ -1.28
HDAC3-202ENST00000459727 FBXL7Q9UJT9 491 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 MSRB2Q9Y3D2 182 aa7.04□□□□□ -1.28
HDAC3-202ENST00000459727 PRR14LQ5THK1 2151 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 TRBV19A0A075B6N1 114 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 TRAV34A0A0B4J273 112 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 ODF3BA8MYP8 253 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 M0R2Z0 102 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 TIMM23O14925 209 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 GNG7O60262 68 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 PLAUP00749 431 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-202ENST00000459727 RPS20P60866 119 aaKnown RBP7.03□□□□□ -1.28
HDAC3-202ENST00000459727 GNG5P63218 68 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 SLC35B1P78383 322 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 FOXC1Q12948 553 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 COL5A1-AS1Q5SY13 56 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 C16orf54Q6UWD8 224 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 UNQ6494/PRO21346Q6UXR6 183 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 RNF125Q96EQ8 232 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 LINC00479Q96M42 142 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 FAM103A1Q9BTL3 118 aaKnown RBP7.03□□□□□ -1.28
HDAC3-202ENST00000459727 SSBP3Q9BWW4 388 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-202ENST00000459727 HSPB8Q9UJY1 196 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 PAM16Q9Y3D7 125 aa7.03□□□□□ -1.28
HDAC3-202ENST00000459727 LOC105371242A0A075B767 164 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms