RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 RAB9AP51151 201 aa18.93■□□□□ 0.62
U2AF1-204ENST00000459639 SLC35B1P78383 322 aa18.93■□□□□ 0.62
U2AF1-204ENST00000459639 S100A7AQ86SG5 101 aa18.93■□□□□ 0.62
U2AF1-204ENST00000459639 TXNDC17Q9BRA2 123 aa18.93■□□□□ 0.62
U2AF1-204ENST00000459639 CD81P60033 236 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 ESM1Q9NQ30 184 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 PUS1Q9Y606 427 aaKnown RBP eCLIP18.92■□□□□ 0.62
U2AF1-204ENST00000459639 CD99P14209 185 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 UBE2G2P60604 165 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 UBE2L3P68036 154 aaKnown RBP18.92■□□□□ 0.62
U2AF1-204ENST00000459639 USF2Q15853 346 aaPredicted RBP18.92■□□□□ 0.62
U2AF1-204ENST00000459639 ZNF329Q86UD4 541 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 ZNF414Q96IQ9 312 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 SHANK2-AS3Q9BTD1 123 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 PAXXQ9BUH6 204 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 OR51M1Q9H341 326 aa18.92■□□□□ 0.62
U2AF1-204ENST00000459639 OTOGQ6ZRI0 2925 aa18.91■□□□□ 0.62
U2AF1-204ENST00000459639 H3BRN7 92 aa18.91■□□□□ 0.62
U2AF1-204ENST00000459639 RELQ04864 619 aaPredicted RBP18.91■□□□□ 0.62
U2AF1-204ENST00000459639 CYB561D1Q8N8Q1 229 aa18.91■□□□□ 0.62
U2AF1-204ENST00000459639 GNB4Q9HAV0 340 aa18.91■□□□□ 0.62
U2AF1-204ENST00000459639 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.9■□□□□ 0.62
U2AF1-204ENST00000459639 C11orf94C9JXX5 98 aa18.9■□□□□ 0.62
U2AF1-204ENST00000459639 OR10J4P0C629 311 aa18.9■□□□□ 0.62
U2AF1-204ENST00000459639 SOHLH1Q5JUK2 328 aa18.9■□□□□ 0.62
U2AF1-204ENST00000459639 ZNF418Q8TF45 676 aaPredicted RBP18.9■□□□□ 0.62
U2AF1-204ENST00000459639 FAM181BA6NEQ2 426 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 TMEM250H0YL14 139 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 RPL15P61313 204 aaKnown RBP18.89■□□□□ 0.61
U2AF1-204ENST00000459639 FOXE3Q13461 319 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 CST9LP1Q5W188 147 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 ZNF343Q6P1L6 599 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 TEX38Q6PEX7 206 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 OR4F5Q8NH21 305 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 OR4F4Q96R69 305 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 YTHDF2Q9Y5A9 579 aaKnown RBP18.89■□□□□ 0.61
U2AF1-204ENST00000459639 FAM74A7A6NL05 159 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 BMPR1BO00238 502 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 ELANEP08246 267 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 PYYP10082 97 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 ARL3P36405 182 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 FAM209BQ5JX69 171 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 ZFAND3Q9H8U3 227 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 SERTAD4Q9NUC0 356 aa18.89■□□□□ 0.61
U2AF1-204ENST00000459639 GP9P14770 177 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 S100A7P31151 101 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 ATP5G3P48201 142 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 TOMM20LQ6UXN7 152 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 LCNL1Q6ZST4 164 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 CCDC28AQ8IWP9 274 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 SVBPQ8N300 66 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 FXYD5Q96DB9 178 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 TMEM14CQ9P0S9 112 aa18.88■□□□□ 0.61
U2AF1-204ENST00000459639 PPP5D1E7EU14 171 aa18.87■□□□□ 0.61
U2AF1-204ENST00000459639 PDE6DO43924 150 aa18.87■□□□□ 0.61
U2AF1-204ENST00000459639 RNASE1P07998 156 aaKnown RBP18.87■□□□□ 0.61
U2AF1-204ENST00000459639 GUCA2BQ16661 112 aa18.87■□□□□ 0.61
U2AF1-204ENST00000459639 OR4X2Q8NGF9 303 aa18.87■□□□□ 0.61
U2AF1-204ENST00000459639 RABAC1Q9UI14 185 aa18.87■□□□□ 0.61
U2AF1-204ENST00000459639 RNF24Q9Y225 148 aa18.87■□□□□ 0.61
U2AF1-204ENST00000459639 IGHV3-11P01762 117 aa18.86■□□□□ 0.61
U2AF1-204ENST00000459639 CEBPGP53567 150 aa18.86■□□□□ 0.61
U2AF1-204ENST00000459639 FAM90A2PQ658T7 463 aa18.86■□□□□ 0.61
U2AF1-204ENST00000459639 LEMD1Q68G75 181 aa18.86■□□□□ 0.61
U2AF1-204ENST00000459639 C10orf99Q6UWK7 81 aa18.86■□□□□ 0.61
U2AF1-204ENST00000459639 Q6ZSV7 163 aa18.86■□□□□ 0.61
U2AF1-204ENST00000459639 HIVEP2P31629 2446 aa18.86■□□□□ 0.61
U2AF1-204ENST00000459639 IGHV3-35A0A0C4DH35 117 aa18.85■□□□□ 0.61
U2AF1-204ENST00000459639 A0A1W2PRE2 83 aa18.85■□□□□ 0.61
U2AF1-204ENST00000459639 F6UZH7 168 aa18.85■□□□□ 0.61
U2AF1-204ENST00000459639 HILS1P60008 231 aa18.85■□□□□ 0.61
U2AF1-204ENST00000459639 KIAA0141Q14154 515 aaPredicted RBP18.85■□□□□ 0.61
U2AF1-204ENST00000459639 RNF152Q8N8N0 203 aa18.85■□□□□ 0.61
U2AF1-204ENST00000459639 MYOZ3Q8TDC0 251 aa18.85■□□□□ 0.61
U2AF1-204ENST00000459639 ZNF98A6NK75 572 aa18.85■□□□□ 0.61
U2AF1-204ENST00000459639 BPIFA4PQ86YQ2 179 aa18.84■□□□□ 0.61
U2AF1-204ENST00000459639 TRBV12-3P01733 135 aa18.83■□□□□ 0.61
U2AF1-204ENST00000459639 NKX6-2Q9C056 277 aaPredicted RBP18.83■□□□□ 0.61
U2AF1-204ENST00000459639 ANK3Q12955 4377 aaKnown RBP18.83■□□□□ 0.6
U2AF1-204ENST00000459639 SNAPINO95295 136 aa18.82■□□□□ 0.6
U2AF1-204ENST00000459639 JMJD8Q96S16 334 aa18.82■□□□□ 0.6
U2AF1-204ENST00000459639 NDUFA4O00483 81 aa18.82■□□□□ 0.6
U2AF1-204ENST00000459639 RPLP1P05386 114 aaKnown RBP18.82■□□□□ 0.6
U2AF1-204ENST00000459639 CRYBA1P05813 215 aa18.82■□□□□ 0.6
U2AF1-204ENST00000459639 NBEAP1P0C6P0 100 aa18.81■□□□□ 0.6
U2AF1-204ENST00000459639 HIST1H1EP10412 219 aaKnown RBP18.81■□□□□ 0.6
U2AF1-204ENST00000459639 PEF1Q9UBV8 284 aaKnown RBP18.81■□□□□ 0.6
U2AF1-204ENST00000459639 GGTLC3B5MD39 225 aa18.8■□□□□ 0.6
U2AF1-204ENST00000459639 GGCTO75223 188 aaKnown RBP18.8■□□□□ 0.6
U2AF1-204ENST00000459639 FAM74A3Q4VXF1 159 aa18.8■□□□□ 0.6
U2AF1-204ENST00000459639 OR4F17Q8NGA8 305 aa18.8■□□□□ 0.6
U2AF1-204ENST00000459639 C11orf52Q96A22 123 aa18.8■□□□□ 0.6
U2AF1-204ENST00000459639 NIPSNAP3BQ9BS92 247 aa18.8■□□□□ 0.6
U2AF1-204ENST00000459639 CLPSL1A2RUU4 121 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 MRPS12O15235 138 aaKnown RBP18.79■□□□□ 0.6
U2AF1-204ENST00000459639 KLHDC1Q8N7A1 406 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 RPUSD4Q96CM3 377 aaKnown RBP18.79■□□□□ 0.6
U2AF1-204ENST00000459639 UBE2E2Q96LR5 201 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 PARLQ9H300 379 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 IGHV3OR16-8A0A075B7F1 116 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms