RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 RPS25P62851 125 aaKnown RBP10.42□□□□□ -0.74
SF3B4-202ENST00000457312 BSXQ3C1V8 233 aa10.42□□□□□ -0.74
SF3B4-202ENST00000457312 LINC01556Q5JQF7 62 aa10.42□□□□□ -0.74
SF3B4-202ENST00000457312 CCDC28AQ8IWP9 274 aa10.42□□□□□ -0.74
SF3B4-202ENST00000457312 PRO0255Q9UI72 69 aa10.42□□□□□ -0.74
SF3B4-202ENST00000457312 V9GY05 133 aa10.42□□□□□ -0.74
SF3B4-202ENST00000457312 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 METTL21EPA6NDL7 271 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 PRAF2O60831 178 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 GYPEP15421 78 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 IZUMO4Q1ZYL8 232 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 DNAL1Q4LDG9 190 aa10.41□□□□□ -0.74
SF3B4-202ENST00000457312 A0A0J9YXV3 536 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 OR5AC1P0C628 307 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 SRIP30626 198 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 RANBP1P43487 201 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 GNG2P59768 71 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 KRTAP10-8P60410 259 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 RHOBP62745 196 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 ZNF415Q09FC8 603 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 IGFL4Q6B9Z1 124 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 TMEM91Q6ZNR0 172 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 RNF182Q8N6D2 247 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 BEST4Q8NFU0 473 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 BORCS5Q969J3 196 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 ATG5Q9H1Y0 275 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 PFDN2Q9UHV9 154 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 FUT9Q9Y231 359 aa10.4□□□□□ -0.74
SF3B4-202ENST00000457312 K7EQD1 137 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 SLC25A4P12235 298 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 TNFSF8P32971 234 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 HIST1H1AQ02539 215 aaPredicted RBP10.39□□□□□ -0.75
SF3B4-202ENST00000457312 OR8I2Q8N0Y5 310 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 HSD17B11Q8NBQ5 300 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 MRGPRFQ96AM1 343 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 C8orf49Q96NF6 230 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 C20orf144Q9BQM9 153 aa10.39□□□□□ -0.75
SF3B4-202ENST00000457312 TRAV8-2A0A0B4J237 113 aa10.38□□□□□ -0.75
SF3B4-202ENST00000457312 GYG2O15488 501 aa10.38□□□□□ -0.75
SF3B4-202ENST00000457312 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
SF3B4-202ENST00000457312 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.38□□□□□ -0.75
SF3B4-202ENST00000457312 NANOGP1Q8N7R0 232 aa10.38□□□□□ -0.75
SF3B4-202ENST00000457312 THAP8Q8NA92 274 aa10.38□□□□□ -0.75
SF3B4-202ENST00000457312 RRNAD1Q96FB5 475 aaKnown RBP10.38□□□□□ -0.75
SF3B4-202ENST00000457312 TRGV1A0A0A0MS02 117 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 HERV-K104P61576 105 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 PSG3Q16557 428 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 SPARTQ8N0X7 666 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 ZNF738Q8NE65 137 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 NPIPB3Q92617 1050 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 ST6GAL2Q96JF0 529 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 PPP1R14DQ9NXH3 145 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 RPH3ALQ9UNE2 315 aa10.37□□□□□ -0.75
SF3B4-202ENST00000457312 OR8A1Q8NGG7 326 aa10.36□□□□□ -0.75
SF3B4-202ENST00000457312 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
SF3B4-202ENST00000457312 SLC25A32Q9H2D1 315 aa10.36□□□□□ -0.75
SF3B4-202ENST00000457312 HHLA3Q9XRX5 114 aa10.36□□□□□ -0.75
SF3B4-202ENST00000457312 ARL6IP5O75915 188 aa10.35□□□□□ -0.75
SF3B4-202ENST00000457312 OR2F1Q13607 317 aa10.35□□□□□ -0.75
SF3B4-202ENST00000457312 LAGE3Q14657 143 aa10.35□□□□□ -0.75
SF3B4-202ENST00000457312 GFI1BQ5VTD9 330 aa10.35□□□□□ -0.75
SF3B4-202ENST00000457312 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
SF3B4-202ENST00000457312 RSG1Q9BU20 258 aa10.35□□□□□ -0.75
SF3B4-202ENST00000457312 C9JCJ5 164 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 HTR2BP41595 481 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 CBX5P45973 191 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 GALR1P47211 349 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 SLAQ13239 276 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 FHL2Q14192 279 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 HOGA1Q86XE5 327 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 BLNKQ8WV28 456 aa10.34□□□□□ -0.75
SF3B4-202ENST00000457312 IFITM5A6NNB3 132 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 E5RGE8 158 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 GATA2P23769 480 aaPredicted RBP10.33□□□□□ -0.76
SF3B4-202ENST00000457312 SCAND1P57086 179 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 LYZP61626 148 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 IDNKQ5T6J7 187 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 PPP1R14BQ96C90 147 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 PARD6GQ9BYG4 376 aaPredicted RBP10.33□□□□□ -0.76
SF3B4-202ENST00000457312 CCDC90BQ9GZT6 254 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 FXYD6Q9H0Q3 95 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 ENY2Q9NPA8 101 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 GSN-AS1Q9NRJ2 163 aa10.33□□□□□ -0.76
SF3B4-202ENST00000457312 A0A0D9SG52 128 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 GPR31O00270 319 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 IGHV3-30P01768 117 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 IGHV3-33P01772 117 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 IGHV3-30-3P0DP02 117 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 IGHV3-30-5P0DP03 117 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 ARRDC1Q8N5I2 433 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 RNASEH2CQ8TDP1 164 aaKnown RBP10.32□□□□□ -0.76
SF3B4-202ENST00000457312 VGLL1Q99990 258 aa10.32□□□□□ -0.76
SF3B4-202ENST00000457312 PANO1I0J062 215 aa10.31□□□□□ -0.76
SF3B4-202ENST00000457312 CASQ2O14958 399 aaPredicted RBP10.31□□□□□ -0.76
SF3B4-202ENST00000457312 SPINK4O60575 86 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms