RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 TECRQ9NZ01 308 aaKnown RBP9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 RABAC1Q9UI14 185 aa9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 FUT9Q9Y231 359 aa9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 C8orf88P0DMB2 117 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 NPPCP23582 126 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 ZNF726P1Q15940 193 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 LCN15Q6UWW0 184 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 C11orf44Q8N8P7 122 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 STXBP6Q8NFX7 210 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 OR1N2Q8NGR9 330 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 LYPD6BQ8NI32 183 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 METTL26Q96S19 204 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 SLC25A39Q9BZJ4 359 aaPredicted RBP9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 HRH4Q9H3N8 390 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 SLC25A22Q9H936 323 aa9.63□□□□□ -0.87
HLA-DPA1-244ENST00000453337 IGHV4OR15-8A0A075B7B6 117 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 A0A087WW49 117 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 ZNF320A2RRD8 509 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 LINC01619G3V211 115 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 K7EMT4 169 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 CXorf1O96002 111 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 STAG3L2P0CL84 134 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 STAG3L3P0CL85 134 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 KHDC3LQ587J8 217 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 PQLC2Q6ZP29 291 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 MIR17HGQ75NE6 70 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 OR11H1Q8NG94 326 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 PCNPQ8WW12 178 aaKnown RBP9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 NARS2Q96I59 477 aaKnown RBP9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 ZNF414Q96IQ9 312 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 SHANK2-AS3Q9BTD1 123 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 C20orf24Q9BUV8 137 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 UFC1Q9Y3C8 167 aa9.62□□□□□ -0.87
HLA-DPA1-244ENST00000453337 ZNF98A6NK75 572 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 LGALS9O00182 355 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 HMGB3O15347 200 aaKnown RBP9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 CRYBB3P26998 211 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 NDUFA5Q16718 116 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 AWAT1Q58HT5 328 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 C18orf65Q6ZTR6 163 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 NDUFA11Q86Y39 141 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 TMEM190Q8WZ59 177 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 UHRF2Q96PU4 802 aa9.61□□□□□ -0.87
HLA-DPA1-244ENST00000453337 A0A1W2PRX2 142 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 A0A1W2PS18 150 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 LINC00862A6NCI5 91 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 H3BRN7 92 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 CCL24O00175 119 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 PPT1P50897 306 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 PMS2P11Q13670 270 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 KLF5Q13887 457 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 C1orf194Q5T5A4 169 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 SPATA31B1PQ5VZV4 182 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 IL34Q6ZMJ4 242 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 SSX7Q7RTT5 188 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 REC114Q7Z4M0 266 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 PRIMA1Q86XR5 153 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 C1QL4Q86Z23 238 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 MARC2Q969Z3 335 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 MED9Q9NWA0 146 aa9.6□□□□□ -0.87
HLA-DPA1-244ENST00000453337 IGHV3OR16-8A0A075B7F1 116 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 TRAV5A0A0B4J249 113 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 OR7C2O60412 319 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 ARL14EPLP0DKL9 152 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 BMI1P35226 326 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 PSMB3P49720 205 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 FGF8P55075 233 aaPredicted RBP9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 KRTAP10-3P60369 221 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 MORN5Q5VZ52 161 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 UNQ9165/PRO28630Q6UXU0 137 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 BPIFA4PQ86YQ2 179 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 TMEM158Q8WZ71 300 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 GRAMD2BQ96HH9 432 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 FAM167A-AS1Q96KT0 104 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 GPR82Q96P67 336 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 PAXXQ9BUH6 204 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 OR51M1Q9H341 326 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 TMEM231Q9H6L2 316 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 DAZ1Q9NQZ3 744 aaKnown RBP9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 U3KQE9 123 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 CUBNO60494 3623 aa9.59□□□□□ -0.87
HLA-DPA1-244ENST00000453337 A0A1B0GV50 99 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 ZNF207O43670 478 aaKnown RBP9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 BUB3O43684 328 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 IFNA1P01562 189 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 RPL7P18124 248 aaKnown RBP9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 GCHFRP30047 84 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 MYCNOSP40205 109 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 CCL20P78556 96 aa9.58□□□□□ -0.88
HLA-DPA1-244ENST00000453337 DEFB136Q30KP8 78 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms