RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 FNDC10F2Z333 226 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 ZNF137PP52743 207 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 VMA21Q3ZAQ7 101 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 TMEM256Q8N2U0 113 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 THYN1Q9P016 225 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 MRPL27Q9P0M9 148 aaKnown RBP9.69□□□□□ -0.86
COL27A1-202ENST00000451716 A0A1B0GUS0 222 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 TSPAN13O95857 204 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 AREGP15514 252 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 CRYBB3P26998 211 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 HLA-DRB5Q30154 266 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 Q6ZWC4 215 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 C8orf31Q8N9H6 132 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 ONECUT1Q9UBC0 465 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 INSIG2Q9Y5U4 225 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 K7EN84 100 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 IGLV1-47P01700 117 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 IGLC2P0DOY2 106 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 IGLC3P0DOY3 106 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 LY6DQ14210 128 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 TNXAQ16473 311 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 FBXL19-AS1Q494R0 122 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 OR4B1Q8NGF8 309 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 OR1B1Q8NGR6 318 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 CRYBG3Q68DQ2 2970 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 VPS13CQ709C8 3753 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 NUPR1O60356 82 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 UCNP55089 124 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 KIAA1644Q3SXP7 199 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 SGMS2Q8NHU3 365 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 YAE1D1Q9NRH1 226 aa9.68□□□□□ -0.86
COL27A1-202ENST00000451716 TECRQ9NZ01 308 aaKnown RBP9.68□□□□□ -0.86
COL27A1-202ENST00000451716 IGHV1-3A0A0C4DH29 117 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 BUB1B-PAK6H3BSN5 160 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 SLC17A3O00476 420 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 IL3RAP26951 378 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
COL27A1-202ENST00000451716 PNKDQ8N490 385 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 CENPEQ02224 2701 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 MDFIC2A0A1B0GVS7 189 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 GGTLC3B5MD39 225 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 MOSP00540 346 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 GPR6P46095 362 aaPredicted RBP9.67□□□□□ -0.86
COL27A1-202ENST00000451716 MFAP2P55001 183 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 OR4A5Q8NH83 315 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 SLC25A33Q9BSK2 321 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 CLEC7AQ9BXN2 247 aa9.67□□□□□ -0.86
COL27A1-202ENST00000451716 A0A1W2PRD5 423 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 A0A1W2PRF3 423 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 A0A1W2PRM7 423 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 IGLC7A0M8Q6 106 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 PYYP10082 97 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 GATA3P23771 443 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 CD24P25063 80 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 TSPOP30536 169 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 PLP1P60201 277 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 ASPHD1Q5U4P2 390 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 TXNDC17Q9BRA2 123 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 IGKV1D-37A0A075B6S9 117 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 SRP14P37108 136 aaKnown RBP9.66□□□□□ -0.86
COL27A1-202ENST00000451716 CNN1P51911 297 aaKnown RBP9.66□□□□□ -0.86
COL27A1-202ENST00000451716 ATP5IP56385 69 aaPredicted RBP9.66□□□□□ -0.86
COL27A1-202ENST00000451716 KCNIP4Q6PIL6 250 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 RPEQ96AT9 228 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 FBXL15Q9H469 300 aa9.66□□□□□ -0.86
COL27A1-202ENST00000451716 PSMB11A5LHX3 300 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 FCN1O00602 326 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 C8orf88P0DMB2 117 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 CTRLP40313 264 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 PATE2Q6UY27 113 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 OR5AU1Q8NGC0 362 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 SLC25A2Q9BXI2 301 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 TMEM167BQ9NRX6 74 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 SIGLEC9Q9Y336 463 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 COX7A2P2O60397 106 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 RPL27AP46776 148 aaKnown RBP9.65□□□□□ -0.86
COL27A1-202ENST00000451716 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL27A1-202ENST00000451716 PQLC2Q6ZP29 291 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 OR8B3Q8NGG8 313 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 BTF3L4Q96K17 158 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 FAM167A-AS1Q96KT0 104 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 ZNF355PQ9NSJ1 428 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 HILPDAQ9Y5L2 63 aa9.65□□□□□ -0.86
COL27A1-202ENST00000451716 CACNA1BQ00975 2339 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 INS-IGF2F8WCM5 200 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 TAX1BP3O14907 124 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.87
COL27A1-202ENST00000451716 KLRD1Q13241 179 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 CENPWQ5EE01 88 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 OR10G8Q8NGN5 311 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 C11orf52Q96A22 123 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 ZC2HC1AQ96GY0 325 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 EAF1Q96JC9 268 aaPredicted RBP9.65□□□□□ -0.87
COL27A1-202ENST00000451716 LINC00479Q96M42 142 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 MRPS16Q9Y3D3 137 aaKnown RBP9.65□□□□□ -0.87
COL27A1-202ENST00000451716 SELENOKQ9Y6D0 94 aa9.65□□□□□ -0.87
COL27A1-202ENST00000451716 HELTA6NFD8 242 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 CD99P14209 185 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms