RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 NHLRC4P0CG21 123 aaPredicted RBP12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 CLEC19AQ6UXS0 136 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 TMEM144Q7Z5S9 345 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 NPIPB3Q92617 1050 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 SMDT1Q9H4I9 107 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 NUPL2O15504 423 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 IGLV1-51P01701 117 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 CLEC3BP05452 202 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 FABP1P07148 127 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 RAB31Q13636 194 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 RPEL1Q2QD12 228 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 VWC2Q2TAL6 325 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 SPSB3Q6PJ21 355 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 TEPPQ6URK8 271 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 OR9G4Q8NGQ1 327 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 PLA2G2EQ9NZK7 142 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 U3KQK5 164 aa12.96□□□□□ -0.33
PRPF40A-204ENST00000450303 ZFP92A6NM28 416 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 AGPAT2O15120 278 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 MPDU1O75352 247 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 GPR183P32249 361 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 ARL3P36405 182 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 GUK1Q16774 197 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 SBSPONQ8IVN8 264 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 CCDC140Q96MF4 163 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 WWC2-AS2Q96NR7 200 aa12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 EIF5A2Q9GZV4 153 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-204ENST00000450303 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 OR2T8A6NH00 312 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 BMPR1BO00238 502 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 TGOLN2O43493 480 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 CD5P06127 495 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 OR10J1P30954 320 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 SERF2P84101 59 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 RELQ04864 619 aaPredicted RBP12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 BTN1A1Q13410 526 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 C10orf91Q5T1B1 145 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 THAP8Q8NA92 274 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 TMEM231Q9H6L2 316 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 TIMM9Q9Y5J7 89 aa12.94□□□□□ -0.34
PRPF40A-204ENST00000450303 PPP5D1E7EU14 171 aa12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 GGCTO75223 188 aaKnown RBP12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 CSN3P07498 182 aa12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 SFTA3P0C7M3 94 aa12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 FRMD6-AS1P0C7T7 363 aa12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 TRGV9Q99603 122 aa12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 MRPL36Q9P0J6 103 aaKnown RBP12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 WDR83OSQ9Y284 106 aa12.93□□□□□ -0.34
PRPF40A-204ENST00000450303 C17orf112F2Z3M2 114 aa12.92□□□□□ -0.34
PRPF40A-204ENST00000450303 F8W735 103 aaPredicted RBP12.92□□□□□ -0.34
PRPF40A-204ENST00000450303 MBP02144 154 aa12.92□□□□□ -0.34
PRPF40A-204ENST00000450303 FGF7P21781 194 aa12.92□□□□□ -0.34
PRPF40A-204ENST00000450303 Q8N1Y9 231 aa12.92□□□□□ -0.34
PRPF40A-204ENST00000450303 ZNF709Q8N972 641 aa12.92□□□□□ -0.34
PRPF40A-204ENST00000450303 WDR61Q9GZS3 305 aaKnown RBP12.92□□□□□ -0.34
PRPF40A-204ENST00000450303 CTSGP08311 255 aa12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 IGLC1P0CG04 106 aa12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 YPEL3P61236 119 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 SELENOTP62341 195 aa12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 TIGITQ495A1 244 aa12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 ZNF600Q6ZNG1 722 aa12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 Q8WTZ3 238 aa12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 KCNIP2Q9NS61 270 aa12.91□□□□□ -0.34
PRPF40A-204ENST00000450303 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 OR2C1O95371 312 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 IFNA1P01562 189 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 EDN2P20800 178 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 FHITP49789 147 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 SRSF3P84103 164 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 FAM106AQ4KMX7 169 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 TMEM41BQ5BJD5 291 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 CYP2G1PQ6ZSU1 146 aa12.9□□□□□ -0.34
PRPF40A-204ENST00000450303 TRAV1-1A0A0B4J248 108 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 TOMM40O96008 361 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 RD3LP0DJH9 198 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 IGHV4-30-4P0DP06 118 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 PPT1P50897 306 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 ADAMTSL5Q6ZMM2 481 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 SFT2D1Q8WV19 159 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 CHRDL1Q9BU40 450 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 PEMTQ9UBM1 199 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 SELENOKQ9Y6D0 94 aa12.89□□□□□ -0.35
PRPF40A-204ENST00000450303 IGKV1D-37A0A075B6S9 117 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 IGKV1OR2-108A0A075B7D4 117 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 RBFOX3A6NFN3 312 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 TSPAN4O14817 238 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 ADCYAP1P18509 176 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 ADMP35318 185 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 GPHB5Q86YW7 130 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 MGST2Q99735 147 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 NPCDR1Q9BY65 106 aa12.88□□□□□ -0.35
PRPF40A-204ENST00000450303 NDUFA4O00483 81 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 YIF1AO95070 293 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 S100A7P31151 101 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms