RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 HCFC1P51610 2035 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 A0A1B0GW15 77 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 PPIFP30405 207 aaKnown RBP6.94□□□□□ -1.3
LSM5-208ENST00000450169 IFI27P40305 119 aaPredicted RBP6.94□□□□□ -1.3
LSM5-208ENST00000450169 LOXL1Q08397 574 aaPredicted RBP6.94□□□□□ -1.3
LSM5-208ENST00000450169 TMEM178AQ8NBL3 297 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 SMRP1Q8NCR6 262 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 DEFB126Q9BYW3 111 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 PRRG4Q9BZD6 226 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 ZNF492Q9P255 531 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 TNFRSF18Q9Y5U5 241 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 IGLV3-12A0A075B6K2 115 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 FAM90A27PA6NNH2 459 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 C16orf97H3BN30 126 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 K7EMI3 77 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 PROP1O75360 226 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 MOSP00540 346 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 HSPE1P61604 102 aaKnown RBP6.94□□□□□ -1.3
LSM5-208ENST00000450169 SRYQ05066 204 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 OR5AN1Q8NGI8 311 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 OR9G1Q8NH87 305 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 PRELID3AQ96N28 172 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 RTL8AQ9BWD3 113 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 HIF1ANQ9NWT6 349 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 EPDR1Q9UM22 224 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 KLF12Q9Y4X4 402 aa6.94□□□□□ -1.3
LSM5-208ENST00000450169 B9A039 149 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 SLC25A5P05141 298 aaKnown RBP6.93□□□□□ -1.3
LSM5-208ENST00000450169 Q6AWC8 147 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 WDR86Q86TI4 376 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 RFESDQ8TAC1 157 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 PIFOQ8TCI5 191 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 ITLN1Q8WWA0 313 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 GLMPQ8WWB7 406 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 HINT2Q9BX68 163 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 OCIAD1Q9NX40 245 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 FOXA2Q9Y261 457 aaPredicted RBP6.93□□□□□ -1.3
LSM5-208ENST00000450169 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 IGKV2D-26A0A0A0MRZ7 120 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 CXCL13O43927 109 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 CCL3P10147 92 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 MYCNOSP40205 109 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 C12orf74Q32Q52 190 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 PSMG4Q5JS54 123 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 NFE4Q86UQ8 179 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 TDHQ8IZJ6 230 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 IFI27L1Q96BM0 104 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 S1PR3Q99500 378 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 TMEM14BQ9NUH8 114 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 DKK2Q9UBU2 259 aa6.93□□□□□ -1.3
LSM5-208ENST00000450169 PTPRBP23467 1997 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 IGHV3-64DA0A0J9YX35 117 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 LOC389332A0A1B0GUA5 103 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 A0A1B0GUT8 65 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 ZNF503-AS2A6NEH8 195 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 PRSS29PA6NIE9 313 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 NPIPB5A8MRT5 1133 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 COX7A2P2O60397 106 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 HBDP02042 147 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 COL8A1P27658 744 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 RRN3P1Q2M238 152 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 DEFB133Q30KQ1 61 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 Q6ZS92 163 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 C8orf46Q8TAG6 207 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 FXYD5Q96DB9 178 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 COQ2Q96H96 371 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 FMC1Q96HJ9 113 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 RAX2Q96IS3 184 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 PRRG2O14669 202 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 ARL3P36405 182 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 CFHR1Q03591 330 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 SRSF1Q07955 248 aaKnown RBP eCLIP6.92□□□□□ -1.3
LSM5-208ENST00000450169 MBNL2Q5VZF2 373 aaKnown RBP6.92□□□□□ -1.3
LSM5-208ENST00000450169 C10orf113Q5VZT2 155 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 ZNF562Q6V9R5 426 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 SLC25A48Q6ZT89 311 aaKnown RBP6.92□□□□□ -1.3
LSM5-208ENST00000450169 GGNQ86UU5 652 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 PDPNQ86YL7 162 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 TEX29Q8N6K0 151 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 OR10X1Q8NGY0 326 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 HARBI1Q96MB7 349 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 ZNF714Q96N38 554 aa6.92□□□□□ -1.3
LSM5-208ENST00000450169 H3BS24 57 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 LCE2BO14633 110 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 ARMS2P0C7Q2 107 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 NHLRC4P0CG21 123 aaPredicted RBP6.91□□□□□ -1.3
LSM5-208ENST00000450169 MYOD1P15172 320 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 FXYD7P58549 80 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 RIGQ13278 110 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 RPL39P5Q59GN2 51 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 CFAP126Q5VTH2 177 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 C17orf82Q86X59 251 aaPredicted RBP6.91□□□□□ -1.3
LSM5-208ENST00000450169 PLXDC1Q8IUK5 500 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 OR13A1Q8NGR1 328 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 PROK2Q9HC23 129 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 WDR87Q6ZQQ6 2873 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 FRYLO94915 3013 aa6.91□□□□□ -1.3
LSM5-208ENST00000450169 ADAMTS20P59510 1910 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms