RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 KIAA0141Q14154 515 aaPredicted RBP11.08□□□□□ -0.63
USP39-207ENST00000450066 S100A7AQ86SG5 101 aa11.08□□□□□ -0.63
USP39-207ENST00000450066 A0A1W2PRE2 83 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 SRP14P37108 136 aaKnown RBP11.08□□□□□ -0.64
USP39-207ENST00000450066 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 SIGLECL1Q8N7X8 197 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 USMG5Q96IX5 58 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 SHANK2-AS3Q9BTD1 123 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 MYO9AB2RTY4 2548 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 OTOGQ6ZRI0 2925 aa11.08□□□□□ -0.64
USP39-207ENST00000450066 ZNF727A8MUV8 499 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 M0R036 132 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 NPPCP23582 126 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 CLEC19AQ6UXS0 136 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 TMEM86BQ8N661 226 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 TVP23CQ96ET8 276 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 PRSS22Q9GZN4 317 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 NPFFR1Q9GZQ6 430 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 PARLQ9H300 379 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 YAE1D1Q9NRH1 226 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 ACANP16112 2415 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 NOTCH2Q04721 2471 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 GP9P14770 177 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 TPPP2P59282 170 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 RHEBQ15382 184 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 USF2Q15853 346 aaPredicted RBP11.07□□□□□ -0.64
USP39-207ENST00000450066 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 RPUSD4Q96CM3 377 aaKnown RBP11.07□□□□□ -0.64
USP39-207ENST00000450066 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
USP39-207ENST00000450066 H3BRN7 92 aa11.06□□□□□ -0.64
USP39-207ENST00000450066 TGOLN2O43493 480 aa11.06□□□□□ -0.64
USP39-207ENST00000450066 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
USP39-207ENST00000450066 ZNF343Q6P1L6 599 aa11.06□□□□□ -0.64
USP39-207ENST00000450066 C20orf24Q9BUV8 137 aa11.06□□□□□ -0.64
USP39-207ENST00000450066 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
USP39-207ENST00000450066 C7orf77A4D0Y5 90 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 NDUFB4O95168 129 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 PF4V1P10720 104 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 PNRC1Q12796 327 aaPredicted RBP11.05□□□□□ -0.64
USP39-207ENST00000450066 TMEM95Q3KNT9 176 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 GGTLC3B5MD39 225 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 DNASE2O00115 360 aaPredicted RBP11.05□□□□□ -0.64
USP39-207ENST00000450066 IGHG4P01861 327 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 HNF1AP20823 631 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 ZNF414Q96IQ9 312 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 KLK15Q9H2R5 256 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 ZNF702PQ9H963 129 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 NAT8Q9UHE5 227 aa11.05□□□□□ -0.64
USP39-207ENST00000450066 A0A0G2JLM5 398 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 BMPR1BO00238 502 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 NBEAP1P0C6P0 100 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 RAB9AP51151 201 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 RELQ04864 619 aaPredicted RBP11.04□□□□□ -0.64
USP39-207ENST00000450066 TOMM20LQ6UXN7 152 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 RPS10P5Q9NQ39 176 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 RNF24Q9Y225 148 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 ZNF98A6NK75 572 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 B4DEV8 164 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 S100A7P31151 101 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
USP39-207ENST00000450066 TMEM88Q6PEY1 159 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 BPIFA4PQ86YQ2 179 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 RABAC1Q9UI14 185 aa11.04□□□□□ -0.64
USP39-207ENST00000450066 HIST1H1EP10412 219 aaKnown RBP11.03□□□□□ -0.64
USP39-207ENST00000450066 PSMB8P28062 276 aa11.03□□□□□ -0.64
USP39-207ENST00000450066 CBLN2Q8IUK8 224 aa11.03□□□□□ -0.64
USP39-207ENST00000450066 Q8N2B8 174 aa11.03□□□□□ -0.64
USP39-207ENST00000450066 DERL1Q9BUN8 251 aa11.03□□□□□ -0.64
USP39-207ENST00000450066 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
USP39-207ENST00000450066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.02□□□□□ -0.64
USP39-207ENST00000450066 IGHV3-35A0A0C4DH35 117 aa11.02□□□□□ -0.64
USP39-207ENST00000450066 MYCNOSP40205 109 aa11.02□□□□□ -0.64
USP39-207ENST00000450066 AKR1C3P42330 323 aa11.02□□□□□ -0.64
USP39-207ENST00000450066 ZNF329Q86UD4 541 aa11.02□□□□□ -0.64
USP39-207ENST00000450066 BLNKQ8WV28 456 aa11.02□□□□□ -0.64
USP39-207ENST00000450066 DUX5Q96PT3 197 aa11.02□□□□□ -0.64
USP39-207ENST00000450066 TCEAL7Q9BRU2 100 aa11.02□□□□□ -0.64
USP39-207ENST00000450066 PPP5D1E7EU14 171 aa11.02□□□□□ -0.65
USP39-207ENST00000450066 ARL3P36405 182 aa11.02□□□□□ -0.65
USP39-207ENST00000450066 RANP62826 216 aaKnown RBP11.02□□□□□ -0.65
USP39-207ENST00000450066 SCGB2A2Q13296 93 aa11.02□□□□□ -0.65
USP39-207ENST00000450066 ELOVL1Q9BW60 279 aa11.02□□□□□ -0.65
USP39-207ENST00000450066 SMCO4Q9NRQ5 59 aa11.02□□□□□ -0.65
USP39-207ENST00000450066 A0A087WWC5 75 aa11.01□□□□□ -0.65
USP39-207ENST00000450066 SNRPCP09234 159 aaKnown RBP11.01□□□□□ -0.65
USP39-207ENST00000450066 IGLC2P0DOY2 106 aa11.01□□□□□ -0.65
USP39-207ENST00000450066 CRYBB3P26998 211 aa11.01□□□□□ -0.65
USP39-207ENST00000450066 SLC35B1P78383 322 aa11.01□□□□□ -0.65
USP39-207ENST00000450066 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.01□□□□□ -0.65
USP39-207ENST00000450066 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms