RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 Q8NAQ8 132 aa11.1□□□□□ -0.63
CHD3-205ENST00000449744 PLECQ15149 4684 aaKnown RBP11.09□□□□□ -0.63
CHD3-205ENST00000449744 ZNF705EA8MWA4 302 aaPredicted RBP11.09□□□□□ -0.63
CHD3-205ENST00000449744 SSSCA1O60232 199 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 SCGB1D2O95969 90 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 PSMB3P49720 205 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 OR4D5Q8NGN0 318 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 LYSTQ99698 3801 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 WDR12Q9GZL7 423 aaKnown RBP11.09□□□□□ -0.63
CHD3-205ENST00000449744 SLC25A22Q9H936 323 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 SLC45A2Q9UMX9 530 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 X6R8D5 127 aa11.09□□□□□ -0.63
CHD3-205ENST00000449744 RBMY1A1P0DJD3 496 aaKnown RBP11.08□□□□□ -0.64
CHD3-205ENST00000449744 RBMY1CP0DJD4 496 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 ORM2P19652 201 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 GATA2P23769 480 aaPredicted RBP11.08□□□□□ -0.64
CHD3-205ENST00000449744 BTCP35070 178 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 GALR1P47211 349 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 RBMY1FQ15415 496 aaKnown RBP11.08□□□□□ -0.64
CHD3-205ENST00000449744 TMEM144Q7Z5S9 345 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 CSNK1G2-AS1Q8NCQ2 148 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 TMEM147Q9BVK8 224 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 HRH4Q9H3N8 390 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 ALMS1Q8TCU4 4167 aa11.08□□□□□ -0.64
CHD3-205ENST00000449744 C11orf94C9JXX5 98 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 IGKV3-20P01619 116 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 MEOX2P50222 304 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 IAH1Q2TAA2 248 aaPredicted RBP11.07□□□□□ -0.64
CHD3-205ENST00000449744 FOXI2Q6ZQN5 318 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 OR1B1Q8NGR6 318 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 C2CD4CQ8TF44 421 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 SMIM8Q96KF7 97 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 SAV1Q9H4B6 383 aaPredicted RBP11.07□□□□□ -0.64
CHD3-205ENST00000449744 GSKIPQ9P0R6 139 aa11.07□□□□□ -0.64
CHD3-205ENST00000449744 ZNF98A6NK75 572 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 ISLRO14498 428 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 SOCS3O14543 225 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 LYRM1O43325 122 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 IL5P05113 134 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 GDF5OSQ5U4N7 250 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 EBLN2Q6P2I7 272 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 TMEM182Q6ZP80 229 aaPredicted RBP11.06□□□□□ -0.64
CHD3-205ENST00000449744 CYP2G1PQ6ZSU1 146 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 ZBTB8BQ8NAP8 495 aaPredicted RBP11.06□□□□□ -0.64
CHD3-205ENST00000449744 OR10P1Q8NGE3 313 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 OR4B1Q8NGF8 309 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 MITD1Q8WV92 249 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 GPR82Q96P67 336 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 C20orf85Q9H1P6 137 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 SLC25A32Q9H2D1 315 aa11.06□□□□□ -0.64
CHD3-205ENST00000449744 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 HLA-DMBP28068 263 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 TCTAP57738 103 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 DEFB1P60022 68 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 RAP2BP61225 183 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 RRAS2P62070 204 aaPredicted RBP11.05□□□□□ -0.64
CHD3-205ENST00000449744 LGALS9CQ6DKI2 356 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 GSG1LQ6UXU4 331 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 RSG1Q9BU20 258 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 RPRMQ9NS64 109 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 DOK5Q9P104 306 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 MGAT4CQ9UBM8 478 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 HYDINQ4G0P3 5121 aa11.05□□□□□ -0.64
CHD3-205ENST00000449744 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
CHD3-205ENST00000449744 PMS2P5A8MQ11 134 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 PLA2G10O15496 165 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 TSC22D2O75157 780 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 FXYD7P58549 80 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 TAS2R30P59541 319 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 DLK1P80370 383 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 ZNF846Q147U1 533 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
CHD3-205ENST00000449744 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 IGLL5B9A064 214 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 HYPMO75409 117 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 CCNKO75909 580 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 TCRBP04435 133 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 OR5G3P0C626 314 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 LINC00869P0C866 280 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 PAX9P55771 341 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 SELENOTP62341 195 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 S100A7AQ86SG5 101 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 CLUHP3Q96NS8 147 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 NPVFQ9HCQ7 196 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 HIGD1AQ9Y241 93 aa11.03□□□□□ -0.64
CHD3-205ENST00000449744 TRAV6A0A075B6T7 132 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 FAM25EA8MYX2 175 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 F6UB75 175 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 H3BRN7 92 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 L7N2F9 121 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 VAMP2P63027 116 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 PSG9Q00887 426 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms