RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	LDLRAD4	O15165	306 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	NBEAP1	P0C6P0	100 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	TMEM252	Q8N6L7	170 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	NPB	Q8NG41	125 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	TVP23C	Q96ET8	276 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	SMPX	Q9UHP9	88 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544		A0A087WX48	190 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	IGHV7-4-1	A0A0J9YVY3	117 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	EWSR1	Q01844	656 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
HCG18-238	ENST00000449544		Q6ZNX1	250 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	TCF23	Q7RTU1	214 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	APRG1	Q8IVJ8	170 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	FAM110A	Q9BQ89	295 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	MIXL1	Q9H2W2	232 aa		6.62	□□□□□ -1.35
HCG18-238	ENST00000449544	BPTF	Q12830	3046 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	IGKV3OR2-268	A0A0C4DH90	116 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	C2orf70	A6NJV1	201 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	LAIR2	Q6ISS4	152 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	FRZB	Q92765	325 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	SMIM8	Q96KF7	97 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	LYRM2	Q9NU23	88 aa	Predicted RBP	6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	PLXNB1	O43157	2135 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	GIP	P09681	153 aa	Predicted RBP	6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	SPART-AS1	P0CW21	52 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	CCL18	P55774	89 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	TTC9C	Q8N5M4	171 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	NACA	E9PAV3	2078 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	IGKV1-6	A0A0C4DH72	117 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	FAM90A9P	A6NNJ1	464 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544		G3V4G9	280 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	MPC2	O95563	127 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	IGHV3-53	P01767	116 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	GOLT1A	Q6ZVE7	132 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	LINC00482	Q8N8I6	264 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	TMED6	Q8WW62	240 aa		6.61	□□□□□ -1.35
HCG18-238	ENST00000449544	TRAV9-2	A0A087WT02	112 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	LINC01548	A6NM66	108 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	PROK1	P58294	105 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	GUK1	Q16774	197 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	HAGH	Q16775	308 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	C2orf83	Q53S99	150 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	C19orf35	Q6ZS72	473 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	TMEM61	Q8N0U2	210 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	OR52E5	Q8NH55	327 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	C11orf45	Q8TAV5	145 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	MLX	Q9UH92	298 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544		A0A087X0M5	115 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	TRAV25	A0A0B4J276	109 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544		A0A1B0GX30	115 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	SRRM4	A7MD48	611 aa	Known RBP	6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	UMAD1	C9J7I0	102 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	TMEM50A	O95807	157 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	M6PR	P20645	277 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	ZNF56	Q15929	161 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	SMUG1	Q53HV7	270 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	SMCO4	Q9NRQ5	59 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	TMEM14B	Q9NUH8	114 aa		6.6	□□□□□ -1.35
HCG18-238	ENST00000449544	IGLV2-23	P01705	113 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	CRP	P02741	224 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	PEA15	Q15121	130 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	OR10J3	Q5JRS4	329 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	LINC00299	Q6ZSB3	139 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	PRELID1	Q9Y255	219 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	ZNF98	A6NK75	572 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	CD74	P04233	296 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	SMAGP	Q0VAQ4	97 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	ADIRF	Q15847	76 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	LY6G6F	Q5SQ64	297 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	PRIMA1	Q86XR5	153 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	DEFB4A	O15263	64 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	SPRY2	O43597	315 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	CXorf1	O96002	111 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	NHLRC4	P0CG21	123 aa	Predicted RBP	6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	RAB5A	P20339	215 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	SPINK13	Q1W4C9	94 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544		Q6ZS49	121 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	KCNS1	Q96KK3	526 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	SGK494	Q96LW2	274 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	C16orf95	Q9H693	158 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	SDF2L1	Q9HCN8	221 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	HSPB7	Q9UBY9	170 aa		6.59	□□□□□ -1.35
HCG18-238	ENST00000449544	C15orf62	A8K5M9	175 aa		6.59	□□□□□ -1.36
HCG18-238	ENST00000449544	CTRB1	P17538	263 aa		6.59	□□□□□ -1.36
HCG18-238	ENST00000449544	GNG4	P50150	75 aa		6.59	□□□□□ -1.36
HCG18-238	ENST00000449544	CFHR3	Q02985	330 aa		6.59	□□□□□ -1.36
HCG18-238	ENST00000449544	CTRB2	Q6GPI1	263 aa		6.59	□□□□□ -1.36
HCG18-238	ENST00000449544	PRADC1	Q9BSG0	188 aa		6.59	□□□□□ -1.36
HCG18-238	ENST00000449544	FRY	Q5TBA9	3013 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	TRAV12-3	A0A0B4J271	114 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	TEX48	A0A1B0GUV7	120 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	CYSRT1	A8MQ03	144 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	NPIPB6	E9PJ23	425 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	S100A8	P05109	93 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	FGF8	P55075	233 aa	Predicted RBP	6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	NHLH2	Q02577	135 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	C11orf87	Q6NUJ2	197 aa		6.58	□□□□□ -1.36
HCG18-238	ENST00000449544	BAGE2	Q86Y30	109 aa		6.58	□□□□□ -1.36

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