RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	TXN2	Q99757	166 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	SHANK2-AS3	Q9BTD1	123 aa		13.84	□□□□□ -0.19
LMNA-208	ENST00000448611	ITPR2	Q14571	2701 aa		13.83	□□□□□ -0.2
LMNA-208	ENST00000448611		H3BRN7	92 aa		13.83	□□□□□ -0.2
LMNA-208	ENST00000448611	CTSG	P08311	255 aa		13.83	□□□□□ -0.2
LMNA-208	ENST00000448611	NBEAP1	P0C6P0	100 aa		13.83	□□□□□ -0.2
LMNA-208	ENST00000448611	CRIP2	P52943	208 aa	Predicted RBP	13.83	□□□□□ -0.2
LMNA-208	ENST00000448611	RAB5B	P61020	215 aa		13.83	□□□□□ -0.2
LMNA-208	ENST00000448611	C15orf32	Q32M92	178 aa		13.83	□□□□□ -0.2
LMNA-208	ENST00000448611		Q5PR19	223 aa		13.83	□□□□□ -0.2
LMNA-208	ENST00000448611	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.83	□□□□□ -0.2	3e-7	■■■■□ 22.1
LMNA-208	ENST00000448611	TRBV24-1	A0A075B6N3	115 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	OR2T8	A6NH00	312 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611		K7EN84	100 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	TGFA	P01135	160 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	RHOG	P84095	191 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	LY6E	Q16553	131 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	ZNF600	Q6ZNG1	722 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	C1QL4	Q86Z23	238 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	ZNF502	Q8TBZ5	544 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	BLNK	Q8WV28	456 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	NAV2	Q8IVL1	2488 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	CELSR1	Q9NYQ6	3014 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	RPS10	P46783	165 aa	Known RBP	13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	GALR1	P47211	349 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	RAN	P62826	216 aa	Known RBP	13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	USF2	Q15853	346 aa	Predicted RBP	13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	CENPW	Q5EE01	88 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	NECAP1	Q8NC96	275 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	SFRP2	Q96HF1	295 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	FAM210B	Q96KR6	192 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	TCEAL7	Q9BRU2	100 aa		13.82	□□□□□ -0.2
LMNA-208	ENST00000448611	IGHV4-31	P0DP07	118 aa		13.81	□□□□□ -0.2
LMNA-208	ENST00000448611	HNF1A	P20823	631 aa		13.81	□□□□□ -0.2
LMNA-208	ENST00000448611	OR5B12	Q96R08	314 aa		13.81	□□□□□ -0.2
LMNA-208	ENST00000448611	PYGO2	Q9BRQ0	406 aa		13.81	□□□□□ -0.2
LMNA-208	ENST00000448611	TRAV41	A0A0B4J266	112 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	PPP1R2P9	O14990	202 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	SCGB2A1	O75556	95 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	ADM	P35318	185 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	GNG4	P50150	75 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	TEX38	Q6PEX7	206 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	MBD6	Q96DN6	1003 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	IGF2BP2-AS1	Q96M15	143 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	CHRDL1	Q9BU40	450 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	MDFIC2	A0A1B0GVS7	189 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	PEX7	O00628	323 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	HIST1H1E	P10412	219 aa	Known RBP	13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	KRTAP1-3	Q8IUG1	177 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	BCL6B	Q8N143	479 aa	Predicted RBP	13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	ZNF414	Q96IQ9	312 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611	ZNF586	Q9NXT0	402 aa		13.8	□□□□□ -0.2
LMNA-208	ENST00000448611		M0QZK8	103 aa		13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	IGF1	P05019	195 aa		13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	S100P	P25815	95 aa		13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	SRP14	P37108	136 aa	Known RBP	13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	TAS2R60	P59551	318 aa		13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	LINC00479	Q96M42	142 aa		13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	PITPNC1	Q9UKF7	332 aa		13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	CDC42EP3	Q9UKI2	254 aa		13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	FLNB	O75369	2602 aa	Known RBP	13.79	□□□□□ -0.2
LMNA-208	ENST00000448611	PGP	A6NDG6	321 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611		H3BTX0	84 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	IGLV2-8	P01709	118 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	IGHG2	P01859	326 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	C9orf152	Q5JTZ5	239 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	BPIFA4P	Q86YQ2	179 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	CCDC140	Q96MF4	163 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	EPDR1	Q9UM22	224 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	MAP1A	P78559	2803 aa	Predicted RBP	13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	PDZD2	O15018	2839 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	ZFHX3	Q15911	3703 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	ZNF98	A6NK75	572 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	MRPS12	O15235	138 aa	Known RBP	13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	IGLC2	P0DOY2	106 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	GPR183	P32249	361 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	GNG5	P63218	68 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	OR10G8	Q8NGN5	311 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	MS4A10	Q96PG2	267 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611		Q9H3A6	140 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	LINC00527	Q9UJ94	153 aa		13.78	□□□□□ -0.2
LMNA-208	ENST00000448611	GGCT	O75223	188 aa	Known RBP	13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	FSHB	P01225	129 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	SLC25A5	P05141	298 aa	Known RBP	13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	CLEC3B	P05452	202 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	CNN1	P51911	297 aa	Known RBP	13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	DEFB112	Q30KQ8	113 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	PRSS57	Q6UWY2	283 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	S100A7A	Q86SG5	101 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611		Q96MF0	132 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	IMMP2L	Q96T52	175 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	CR1	P17927	2039 aa		13.77	□□□□□ -0.21
LMNA-208	ENST00000448611	OR5I1	Q13606	314 aa		13.76	□□□□□ -0.21
LMNA-208	ENST00000448611	C5orf17	Q8NAS9	161 aa		13.76	□□□□□ -0.21
LMNA-208	ENST00000448611	EEF1AKMT3	Q96AZ1	226 aa		13.76	□□□□□ -0.21
LMNA-208	ENST00000448611	BIN3	Q9NQY0	253 aa		13.76	□□□□□ -0.21
LMNA-208	ENST00000448611	TRBV19	A0A075B6N1	114 aa		13.76	□□□□□ -0.21
LMNA-208	ENST00000448611	GCG	P01275	180 aa		13.76	□□□□□ -0.21
LMNA-208	ENST00000448611	BLCAP	P62952	87 aa		13.76	□□□□□ -0.21
LMNA-208	ENST00000448611	GAR1	Q9NY12	217 aa	Known RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms