RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ERCC6Q03468 1493 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 CEP164Q9UPV0 1460 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 NUP210LQ5VU65 1888 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 TRAPPC8Q9Y2L5 1435 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 SCN9AQ15858 1988 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 EML6Q6ZMW3 1958 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 ADGRL1O94910 1474 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 TRAV13-1A0A0B4J241 112 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 A0A1B0GVG6 124 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 H3BMG7 143 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 SDCBPO00560 298 aaPredicted RBP2.16□□□□□ -2.06
PMS1-216ENST00000447734 RTL8CO15255 209 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 RER1O15258 196 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 PGLYRP1O75594 196 aaPredicted RBP2.16□□□□□ -2.06
PMS1-216ENST00000447734 CTSGP08311 255 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 TRGC1P0CF51 173 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 FUSP35637 526 aaKnown RBP eCLIP2.16□□□□□ -2.06
PMS1-216ENST00000447734 HINT1P49773 126 aaPredicted RBP2.16□□□□□ -2.06
PMS1-216ENST00000447734 ZNF90Q03938 601 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 TMEM244Q5VVB8 128 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 Q5XG85 94 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 LRRC28Q86X40 367 aaPredicted RBP2.16□□□□□ -2.06
PMS1-216ENST00000447734 C3orf56Q8N813 242 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 LINC00167Q96N53 147 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 BCL2L10Q9HD36 194 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 CBLN4Q9NTU7 201 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 NDUFB11Q9NX14 153 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 CALML5Q9NZT1 146 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 RIC1Q4ADV7 1423 aa2.16□□□□□ -2.06
PMS1-216ENST00000447734 SEC16AO15027 2179 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 A0A096LPI6 279 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 CCDC160A6NGH7 325 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 OR51F1A6NGY5 319 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 ODF3BA8MYP8 253 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 J3QR89 54 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 TPST1O60507 370 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 TIMM17BO60830 172 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 MT-ND4LP03901 98 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 ZNF705BP0CI00 300 aaPredicted RBP2.15□□□□□ -2.07
PMS1-216ENST00000447734 DNAJB13P59910 316 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 TMEM258P61165 79 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 DEFB128Q7Z7B8 93 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 OR5AC2Q9NZP5 309 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 MARCOQ9UEW3 520 aaPredicted RBP2.15□□□□□ -2.07
PMS1-216ENST00000447734 PSORS1C2Q9UIG4 136 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 RIMBP3CA6NJZ7 1639 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 RIMBP3BA6NNM3 1639 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 COL16A1Q07092 1604 aaPredicted RBP2.15□□□□□ -2.07
PMS1-216ENST00000447734 RIMBP3Q9UFD9 1639 aa2.15□□□□□ -2.07
PMS1-216ENST00000447734 KIF26AQ9ULI4 1882 aaPredicted RBP2.15□□□□□ -2.07
PMS1-216ENST00000447734 SLX4Q8IY92 1834 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 NCAPD3P42695 1498 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 WDR90Q96KV7 1748 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 A0A1B0GV90 55 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 HMSDA8MTL9 139 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 A8MWV9 139 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 MT-ND6P03923 174 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 CLPSP04118 112 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 SHBGP04278 402 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 IGKV3-11P04433 115 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 RPL22P35268 128 aaKnown RBP2.14□□□□□ -2.07
PMS1-216ENST00000447734 ERHP84090 104 aaKnown RBP2.14□□□□□ -2.07
PMS1-216ENST00000447734 KRTAP13-2Q52LG2 175 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 Q6ZQT0 140 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 OR4X2Q8NGF9 303 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 OR5H6Q8NGV6 325 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 C1orf54Q8WWF1 131 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 DEDD2Q8WXF8 326 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 PKMYT1Q99640 499 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 TAF1LQ8IZX4 1826 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 BICRAQ9NZM4 1560 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 ARID1AO14497 2285 aa2.14□□□□□ -2.07
PMS1-216ENST00000447734 SCN8AQ9UQD0 1980 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 IGLV3-9A0A075B6K5 115 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 TRBV27A0A0K0K1C4 114 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 PMP2P02689 132 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 CSRP1P21291 193 aaKnown RBP2.13□□□□□ -2.07
PMS1-216ENST00000447734 CRYGSP22914 178 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 S100A1P23297 94 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 AQP4P55087 323 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 KLRD1Q13241 179 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 NNATQ16517 81 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 ZNF791Q3KP31 576 aaPredicted RBP2.13□□□□□ -2.07
PMS1-216ENST00000447734 PRR9Q5T870 116 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 TMEM14EPQ6UXP3 125 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 PATE2Q6UY27 113 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 OR4S1Q8NGB4 309 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 OR4B1Q8NGF8 309 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 OR8B3Q8NGG8 313 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 ZNF418Q8TF45 676 aaPredicted RBP2.13□□□□□ -2.07
PMS1-216ENST00000447734 MAGOHBQ96A72 148 aaKnown RBP2.13□□□□□ -2.07
PMS1-216ENST00000447734 PRELID3AQ96N28 172 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 LINC00467Q9BRT7 94 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 ARHGEF28Q8N1W1 1705 aaKnown RBP2.13□□□□□ -2.07
PMS1-216ENST00000447734 MALRD1Q5VYJ5 2156 aa2.13□□□□□ -2.07
PMS1-216ENST00000447734 MEIKINA0A087WXM9 373 aa2.12□□□□□ -2.07
PMS1-216ENST00000447734 TMSB15BA0A087X1C1 80 aa2.12□□□□□ -2.07
PMS1-216ENST00000447734 MUC21A0A0G2JKD1 596 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms