RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 LCN6P62502 163 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 RHOBP62745 196 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST1H2BCP62807 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 ZNF141Q15928 474 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST2H2BEQ16778 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 AMMECR1LQ6DCA0 310 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 RPL22L1Q6P5R6 122 aaKnown RBP2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 PHF13Q86YI8 300 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 OR13C4Q8NGS5 318 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 OR10K1Q8NGX5 313 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST1H2BHQ93079 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 OR8B2Q96RD0 313 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 GPER1Q99527 375 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST1H2BNQ99877 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST1H2BMQ99879 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 XAGE1AQ9HD64 81 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 C8orf4Q9NR00 106 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 BATF3Q9NR55 127 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 TVP23BQ9NYZ1 205 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 TP73-AS1Q9UF72 201 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 SSR3Q9UNL2 185 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 WDFY3Q8IZQ1 3526 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 DOCK6Q96HP0 2047 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 MAST2Q6P0Q8 1798 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 PLXNA1Q9UIW2 1896 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 POLQO75417 2590 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 IGHV3-15A0A0B4J1V0 119 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 TRAV4A0A0B4J268 109 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 MDFIC2A0A1B0GVS7 189 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 SIGLEC16A6NMB1 481 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 CLDN25C9JDP6 229 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 TP53I11O14683 189 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 LEPROTO15243 131 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 NPYP01303 97 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 IFNA10P01566 189 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 IGKV1-5P01602 117 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 ATP5G3P48201 142 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 ARPC4P59998 168 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 AKR1C1Q04828 323 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 AADACL3Q5VUY0 350 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 C2orf91Q6ZV80 131 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 ZNF439Q8NDP4 499 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 ZNF675Q8TD23 568 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 H1FXQ92522 213 aaKnown RBP2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 C2orf50Q96LR7 162 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 ZNF2Q9BSG1 426 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 PBDC1Q9BVG4 233 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 CYTL1Q9NRR1 136 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 ACER3Q9NUN7 267 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 SCN10AQ9Y5Y9 1956 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 NF1P21359 2839 aa2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 DDX60Q8IY21 1712 aaKnown RBP2.48□□□□□ -2.01
HMGB1P48-201ENST00000446155 CREBBPQ92793 2442 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 ANKRD36CQ5JPF3 1778 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 TRBV19A0A075B6N1 114 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 AIPO00170 330 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 TXNDC9O14530 226 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 CPSF4O95639 269 aaKnown RBP2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 CDS2O95674 445 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 GZMBP10144 247 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 COL8A2P25067 703 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 XCL1P47992 114 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 AP1S1P61966 158 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 SARNPP82979 210 aaKnown RBP2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 RHEBQ15382 184 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 CAPZA3Q96KX2 299 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 MIEN1Q9BRT3 115 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 DERL1Q9BUN8 251 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 TXNL4BQ9NX01 149 aaKnown RBP2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 RELNP78509 3460 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 A0A0G2JMZ2 1700 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 PRR14LQ5THK1 2151 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 SIPA1L1O43166 1804 aa2.47□□□□□ -2.01
HMGB1P48-201ENST00000446155 LCTP09848 1927 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 MGAMO43451 1857 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 KIF26AQ9ULI4 1882 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 FLNCQ14315 2725 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 A0A1W2PQD3 144 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 MAP1LC3B2A6NCE7 125 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 GGT3PA6NGU5 568 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 TSTD3H0UI37 97 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 H3BPC8 53 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 SYNGR2O43760 224 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 IFNA7P01567 189 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 C1QAP02745 245 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 CD24P25063 80 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 HLA-DMBP28068 263 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 G6PCP35575 357 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 GLRXP35754 106 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 FLI1Q01543 452 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 RPL18Q07020 188 aaKnown RBP2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 MIAQ16674 131 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 TMEM78Q5T7P6 136 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 DCUN1D2Q6PH85 259 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 EXOC3-AS1Q8N2X6 119 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 FAM24BQ8N5W8 94 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms