RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 NOL4LQ96MY1 436 aaPredicted RBP13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 IGHV3OR16-8A0A075B7F1 116 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 IGHV3-35A0A0C4DH35 117 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 PRTN3P24158 256 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 SRD5A3Q9H8P0 318 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 TMEM238C9JI98 176 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 CIDEAO60543 219 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 OR1P1Q8NH06 330 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 IMMP2LQ96T52 175 aa13.36□□□□□ -0.27
LAPTM4B-201ENST00000445593 PRB1P04280 392 aa13.35□□□□□ -0.27
LAPTM4B-201ENST00000445593 PSG1P11464 419 aa13.35□□□□□ -0.27
LAPTM4B-201ENST00000445593 CEACAM3P40198 252 aa13.35□□□□□ -0.27
LAPTM4B-201ENST00000445593 OR1L4Q8NGR5 311 aa13.35□□□□□ -0.27
LAPTM4B-201ENST00000445593 RIPPLY3P57055 190 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 NDPQ00604 133 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 NUDT10Q8NFP7 164 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 CFHR4Q92496 578 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 ASCL2Q99929 193 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 FAM120AOSQ5T036 256 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 OR11H6Q8NGC7 330 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 NUDT11Q96G61 164 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 ABCA2Q9BZC7 2435 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 TMEM238LA0A1B0GVL6 79 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 CCL25O15444 150 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 AMBPP02760 352 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 HOXB4P17483 251 aaPredicted RBP13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 CBLN1P23435 193 aa13.34□□□□□ -0.27
LAPTM4B-201ENST00000445593 INS-IGF2F8WCM5 200 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 TXNDC17Q9BRA2 123 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 ZANQ9Y493 2812 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 HYPMO75409 117 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 JOSD1Q15040 202 aaPredicted RBP13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 OR8I2Q8N0Y5 310 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 THAP8Q8NA92 274 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 RASL11BQ9BPW5 248 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
LAPTM4B-201ENST00000445593 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 EFNA4P52798 201 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 CX3CL1P78423 397 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 NRGNQ92686 78 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 PAM16Q9Y3D7 125 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 SRP14P37108 136 aaKnown RBP13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 SELENOTP62341 195 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 FXYD5Q96DB9 178 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 GRIFINA4D1Z8 144 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 PGPA6NDG6 321 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 M0R1W7 72 aa13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
LAPTM4B-201ENST00000445593 ISLRO14498 428 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 C5orf64Q2M2E5 130 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 BCL6BQ8N143 479 aaPredicted RBP13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 C11orf52Q96A22 123 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 PERPQ96FX8 193 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 ALKBH7Q9BT30 221 aaPredicted RBP13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 C19orf24Q9BVV8 132 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 ODF3BA8MYP8 253 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 SMIM15Q7Z3B0 74 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 PYGO2Q9BRQ0 406 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 TLN2Q9Y4G6 2542 aa13.31□□□□□ -0.28
LAPTM4B-201ENST00000445593 CRYGCP07315 174 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 IGLC1P0CG04 106 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 IER3P46695 156 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 A0A1W2PRE2 83 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 TDRG1Q3Y452 100 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 I3L2K1 104 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 OR2J3O76001 311 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 IGHV4-39P01824 125 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 ECSCRQ19T08 205 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 ZNF329Q86UD4 541 aa13.3□□□□□ -0.28
LAPTM4B-201ENST00000445593 HSBP1L1C9JCN9 74 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 K7EIM0 57 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 NBEAP1P0C6P0 100 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 BRS3P32247 399 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 SAA4P35542 130 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 MRPL54Q6P161 138 aaKnown RBP13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 TRGV9Q99603 122 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 TRAV8-1A0A0A6YYK1 113 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 FSTL3O95633 263 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 IGKV1-17P01599 117 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 OR5R1Q8NH85 324 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 FAM168AQ92567 244 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 ARPC1AQ92747 370 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 HIGD1AQ9Y241 93 aa13.29□□□□□ -0.28
LAPTM4B-201ENST00000445593 PEX7O00628 323 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 IL4P05112 153 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 CNN1P51911 297 aaKnown RBP13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 BRD3OSQ6XYD6 125 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 Q71RC1 249 aaPredicted RBP13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 BAGE2Q86Y30 109 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 TBX15Q96SF7 602 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 DOPEY2Q9Y3R5 2298 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 ELOA3CA0A087WX78 387 aaPredicted RBP13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 Q56UQ5 140 aa13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 IBA57Q5T440 356 aaKnown RBP13.28□□□□□ -0.28
LAPTM4B-201ENST00000445593 TMEM219Q86XT9 240 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms