RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 UPK3BQ9BT76 320 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 CACNG5Q9UF02 275 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 SMIM31A0A1B0GVY4 71 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 CEBPZOSA8MTT3 80 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 INSP01308 110 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 CD3DP04234 171 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 GAMTQ14353 236 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 NEDD8Q15843 81 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 RNASE10Q5GAN6 216 aaKnown RBP9.97□□□□□ -0.81
HMGN1-208ENST00000443046 SELENOHQ8IZQ5 122 aaKnown RBP9.97□□□□□ -0.81
HMGN1-208ENST00000443046 OR4C16Q8NGL9 310 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 OR13C8Q8NGS7 320 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 RBPMSQ93062 196 aaKnown RBP9.97□□□□□ -0.81
HMGN1-208ENST00000443046 U3KQ87 197 aa9.97□□□□□ -0.81
HMGN1-208ENST00000443046 TEX13DA0A0J9YY54 714 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-208ENST00000443046 M0R2Z0 102 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 OR5AC1P0C628 307 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 TBPP20226 339 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 MEOX2P50222 304 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.82
HMGN1-208ENST00000443046 CLINT1Q14677 625 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 SPINK13Q1W4C9 94 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 Q6ZRN7 208 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-208ENST00000443046 OR8I2Q8N0Y5 310 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 OR4D10Q8NGI6 311 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 ZNF503Q96F45 646 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 C16orf92Q96LL3 132 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 COMMD3Q9UBI1 195 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 UBR4Q5T4S7 5183 aa9.96□□□□□ -0.82
HMGN1-208ENST00000443046 HMCN2Q8NDA2 5059 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 ZFP92A6NM28 416 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 SNRPGP15A8MWD9 76 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 GPX4P36969 197 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-208ENST00000443046 MEF2DQ14814 521 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 GPR141Q7Z602 305 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 MARCH1Q8TCQ1 289 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 RTBDNQ9BSG5 229 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-208ENST00000443046 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 CACFD1Q9UGQ2 172 aa9.95□□□□□ -0.82
HMGN1-208ENST00000443046 DUSP14O95147 198 aaKnown RBP9.94□□□□□ -0.82
HMGN1-208ENST00000443046 LYZP61626 148 aa9.94□□□□□ -0.82
HMGN1-208ENST00000443046 ESRGQ1W209 222 aa9.94□□□□□ -0.82
HMGN1-208ENST00000443046 Q5VSD8 79 aa9.94□□□□□ -0.82
HMGN1-208ENST00000443046 BAP18Q8IXM2 172 aa9.94□□□□□ -0.82
HMGN1-208ENST00000443046 YIPF6Q96EC8 236 aa9.94□□□□□ -0.82
HMGN1-208ENST00000443046 MTFP1Q9UDX5 166 aa9.94□□□□□ -0.82
HMGN1-208ENST00000443046 TMEM56-RWDD3S4R434 201 aa9.94□□□□□ -0.82
HMGN1-208ENST00000443046 IGKV1OR2-108A0A075B7D4 117 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 TRAV8-2A0A0B4J237 113 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 ATP5IP56385 69 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-208ENST00000443046 LSM3P62310 102 aaKnown RBP9.93□□□□□ -0.82
HMGN1-208ENST00000443046 TMEM268Q5VZI3 342 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 LGI3Q8N145 548 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 OR52I2Q8NH67 350 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 RXFP4Q8TDU9 374 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 UHRF2Q96PU4 802 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 TRGV9Q99603 122 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 RSG1Q9BU20 258 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 SLC25A32Q9H2D1 315 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 NAA60Q9H7X0 242 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 HSPB7Q9UBY9 170 aa9.93□□□□□ -0.82
HMGN1-208ENST00000443046 TRAV12-2A0A075B6T6 113 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 HPGDSO60760 199 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 FABP1P07148 127 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 GALR1P47211 349 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 TAS2R60P59551 318 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 DLK1P80370 383 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 TMEM256Q8N2U0 113 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 LINC00612Q8N6U2 182 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 GNPNAT1Q96EK6 184 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-208ENST00000443046 C16orf74Q96GX8 76 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 SLC45A2Q9UMX9 530 aa9.92□□□□□ -0.82
HMGN1-208ENST00000443046 MRPS16Q9Y3D3 137 aaKnown RBP9.92□□□□□ -0.82
HMGN1-208ENST00000443046 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-208ENST00000443046 TRAV26-1A0A087WT03 109 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 CRYM-AS1A6NIL9 109 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 ZNF98A6NK75 572 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 H3BNG1 76 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 LINC00315P59091 139 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 OR2F1Q13607 317 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 SCGB2B2Q4G0G5 96 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 RNASE12Q5GAN4 147 aaKnown RBP9.91□□□□□ -0.82
HMGN1-208ENST00000443046 CDPF1Q6NVV7 123 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 THAP8Q8NA92 274 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 TMEM229BQ8NBD8 167 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 OR4D5Q8NGN0 318 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 RNASE8Q8TDE3 154 aaKnown RBP9.91□□□□□ -0.82
HMGN1-208ENST00000443046 DTD1Q8TEA8 209 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 IL22RA2Q969J5 263 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 PPP1R14BQ96C90 147 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 SLC35E1Q96K37 410 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 LINC01587Q99440 93 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 RBKSQ9H477 322 aa9.91□□□□□ -0.82
HMGN1-208ENST00000443046 BOLA2-SMG1P6H3BVE0 249 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 GABARAPH6UMI1 98 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 ZNF701M0R085 212 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms