RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 GPR82Q96P67 336 aa7.05□□□□□ -1.28
NR1I3-211ENST00000442691 SLC35B3Q9H1N7 401 aa7.05□□□□□ -1.28
NR1I3-211ENST00000442691 C16orf95Q9H693 158 aa7.05□□□□□ -1.28
NR1I3-211ENST00000442691 CARHSP1Q9Y2V2 147 aaKnown RBP7.05□□□□□ -1.28
NR1I3-211ENST00000442691 IGHV3-21A0A0B4J1V1 117 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 A0A1W2PRE2 83 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 H3BRN7 92 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 NDUFA7O95182 113 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 IGHV3-48P01763 117 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 MEOX2P50222 304 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 CCL20P78556 96 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 C1orf194Q5T5A4 169 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 PATE2Q6UY27 113 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 IL17RELQ6ZVW7 336 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 LINC00305Q7Z4B0 112 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 UBE2E2Q96LR5 201 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 NOL4LQ96MY1 436 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-211ENST00000442691 SHANK2-AS3Q9BTD1 123 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 TREM1Q9NP99 234 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 GNG13Q9P2W3 67 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 PLXNB1O43157 2135 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 CSPG4Q6UVK1 2322 aa7.04□□□□□ -1.28
NR1I3-211ENST00000442691 CSMD1Q96PZ7 3565 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 OR2T8A6NH00 312 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 F6UZH7 168 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 NDUFA4O00483 81 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 OR7C2O60412 319 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 IL4P05112 153 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 CLEC3BP05452 202 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 CRYBA1P05813 215 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 PF4V1P10720 104 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 ORM2P19652 201 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 GATA2P23769 480 aaPredicted RBP7.03□□□□□ -1.28
NR1I3-211ENST00000442691 GPR183P32249 361 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 FGF8P55075 233 aaPredicted RBP7.03□□□□□ -1.28
NR1I3-211ENST00000442691 LYZP61626 148 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 PDE6HQ13956 83 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 ICAM4Q14773 271 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 FAM74A3Q4VXF1 159 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 MIR17HGQ75NE6 70 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 ARL6IP6Q8N6S5 226 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 OR5AU1Q8NGC0 362 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 OR1B1Q8NGR6 318 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 RPUSD4Q96CM3 377 aaKnown RBP7.03□□□□□ -1.28
NR1I3-211ENST00000442691 SLC25A2Q9BXI2 301 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 SLC25A39Q9BZJ4 359 aaPredicted RBP7.03□□□□□ -1.28
NR1I3-211ENST00000442691 SERTAD4Q9NUC0 356 aa7.03□□□□□ -1.28
NR1I3-211ENST00000442691 GGCTO75223 188 aaKnown RBP7.02□□□□□ -1.29
NR1I3-211ENST00000442691 ZNF253O75346 499 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 SFTA3P0C7M3 94 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 GP9P14770 177 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 RPL7P18124 248 aaKnown RBP7.02□□□□□ -1.29
NR1I3-211ENST00000442691 ARL3P36405 182 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 UBE2L3P68036 154 aaKnown RBP7.02□□□□□ -1.29
NR1I3-211ENST00000442691 BPIFA4PQ86YQ2 179 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 LYPD1Q8N2G4 141 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 SVBPQ8N300 66 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 WIPF2Q8TF74 440 aaPredicted RBP7.02□□□□□ -1.29
NR1I3-211ENST00000442691 C11orf52Q96A22 123 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 NARS2Q96I59 477 aaKnown RBP7.02□□□□□ -1.29
NR1I3-211ENST00000442691 MS4A10Q96PG2 267 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 CHRDL1Q9BU40 450 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 PAXXQ9BUH6 204 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 OR51M1Q9H341 326 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 ESM1Q9NQ30 184 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 RABAC1Q9UI14 185 aa7.02□□□□□ -1.29
NR1I3-211ENST00000442691 PUS1Q9Y606 427 aaKnown RBP eCLIP7.02□□□□□ -1.29
NR1I3-211ENST00000442691 OTOGQ6ZRI0 2925 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 TEX15Q9BXT5 2789 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 C11orf94C9JXX5 98 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 SRP19P09132 144 aaKnown RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 LGALS1P09382 135 aaKnown RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 HIST1H1EP10412 219 aaKnown RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 CRYBB3P26998 211 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 BMI1P35226 326 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 CDX1P47902 265 aaPredicted RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 SRSF3P84103 164 aaKnown RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 KIAA0141Q14154 515 aaPredicted RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 USF2Q15853 346 aaPredicted RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 HAGHQ16775 308 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 SOHLH1Q5JUK2 328 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 SPATA31B1PQ5VZV4 182 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 CLEC19AQ6UXS0 136 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 Q6ZSV7 163 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 GPHB5Q86YW7 130 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 OR4F17Q8NGA8 305 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 OR4X2Q8NGF9 303 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 OR4F5Q8NH21 305 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 ZNF503Q96F45 646 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 UHRF2Q96PU4 802 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 OR4F4Q96R69 305 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 PEF1Q9UBV8 284 aaKnown RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 LINC00527Q9UJ94 153 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 MAP1AP78559 2803 aaPredicted RBP7.01□□□□□ -1.29
NR1I3-211ENST00000442691 MYO9AB2RTY4 2548 aa7.01□□□□□ -1.29
NR1I3-211ENST00000442691 ZNF469Q96JG9 3925 aaPredicted RBP7□□□□□ -1.29
NR1I3-211ENST00000442691 A0A1B0GUS0 222 aa7□□□□□ -1.29
NR1I3-211ENST00000442691 A0A1B0GV50 99 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms