RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 NF1P21359 2839 aa14.79□□□□□ -0.04
SNX17-203ENST00000440760 H3BUA1 57 aa14.79□□□□□ -0.04
SNX17-203ENST00000440760 TRBV12-3P01733 135 aa14.79□□□□□ -0.04
SNX17-203ENST00000440760 HSPB1P04792 205 aaKnown RBP14.79□□□□□ -0.04
SNX17-203ENST00000440760 TAS2R45P59539 299 aa14.79□□□□□ -0.04
SNX17-203ENST00000440760 SLC35B3Q9H1N7 401 aa14.79□□□□□ -0.04
SNX17-203ENST00000440760 TRBV7-1A0A0A6YYK4 115 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 WI2-2373I1.2A0A1W2PRP0 233 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 FAM181BA6NEQ2 426 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 SRD5A1P18405 259 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 ATP5G3P48201 142 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 CD81P60033 236 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 MEF2BQ02080 365 aaPredicted RBP14.78□□□□□ -0.04
SNX17-203ENST00000440760 GUCA2BQ16661 112 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 Q8WTZ3 238 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 TMEM160Q9NX00 188 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 YTHDF2Q9Y5A9 579 aaKnown RBP14.78□□□□□ -0.04
SNX17-203ENST00000440760 TGOLN2O43493 480 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 UBE2L3P68036 154 aaKnown RBP14.78□□□□□ -0.04
SNX17-203ENST00000440760 PMS2P11Q13670 270 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 CST9LP1Q5W188 147 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 PQLC2Q6ZP29 291 aa14.78□□□□□ -0.04
SNX17-203ENST00000440760 SLC25A39Q9BZJ4 359 aaPredicted RBP14.78□□□□□ -0.04
SNX17-203ENST00000440760 MRPL27Q9P0M9 148 aaKnown RBP14.78□□□□□ -0.04
SNX17-203ENST00000440760 OR2C1O95371 312 aa14.77□□□□□ -0.04
SNX17-203ENST00000440760 IGHG4P01861 327 aa14.77□□□□□ -0.04
SNX17-203ENST00000440760 RAB9AP51151 201 aa14.77□□□□□ -0.04
SNX17-203ENST00000440760 SEC11CQ9BY50 192 aa14.77□□□□□ -0.04
SNX17-203ENST00000440760 SETXQ7Z333 2677 aaKnown RBP14.77□□□□□ -0.05
SNX17-203ENST00000440760 NSD1Q96L73 2696 aaPredicted RBP14.77□□□□□ -0.05
SNX17-203ENST00000440760 SCGB2A1O75556 95 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 BRI3O95415 125 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 PSMB8P28062 276 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 C10orf91Q5T1B1 145 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 OR4F5Q8NH21 305 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 OR4F4Q96R69 305 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 C11orf94C9JXX5 98 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 CD99P14209 185 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 OR5B12Q96R08 314 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 PAXXQ9BUH6 204 aa14.76□□□□□ -0.05
SNX17-203ENST00000440760 CARHSP1Q9Y2V2 147 aaKnown RBP14.76□□□□□ -0.05
SNX17-203ENST00000440760 ZNF600Q6ZNG1 722 aa14.75□□□□□ -0.05
SNX17-203ENST00000440760 Q8N2B8 174 aa14.75□□□□□ -0.05
SNX17-203ENST00000440760 OR51M1Q9H341 326 aa14.75□□□□□ -0.05
SNX17-203ENST00000440760 SMDT1Q9H4I9 107 aa14.75□□□□□ -0.05
SNX17-203ENST00000440760 SERTAD4Q9NUC0 356 aa14.75□□□□□ -0.05
SNX17-203ENST00000440760 FAM74A7A6NL05 159 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 INAFM1C9JVW0 142 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 H3BRN7 92 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 DNASE2O00115 360 aaPredicted RBP14.74□□□□□ -0.05
SNX17-203ENST00000440760 ATRAIDQ6UW56 229 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 TOMM20LQ6UXN7 152 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 USMG5Q96IX5 58 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 ZFAND3Q9H8U3 227 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 TMEM167BQ9NRX6 74 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 CDC42EP3Q9UKI2 254 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 H3BTX0 84 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 RPLP1P05386 114 aaKnown RBP14.74□□□□□ -0.05
SNX17-203ENST00000440760 GP9P14770 177 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 ARL3P36405 182 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 Q6ZSV7 163 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 CLRN3Q8NCR9 226 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 FXYD5Q96DB9 178 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 SHANK2-AS3Q9BTD1 123 aa14.74□□□□□ -0.05
SNX17-203ENST00000440760 GAR1Q9NY12 217 aaKnown RBP14.74□□□□□ -0.05
SNX17-203ENST00000440760 SOHLH1Q5JUK2 328 aa14.73□□□□□ -0.05
SNX17-203ENST00000440760 FAM90A2PQ658T7 463 aa14.73□□□□□ -0.05
SNX17-203ENST00000440760 OR4X2Q8NGF9 303 aa14.73□□□□□ -0.05
SNX17-203ENST00000440760 SLC35B1P78383 322 aa14.72□□□□□ -0.05
SNX17-203ENST00000440760 SCGB2A2Q13296 93 aa14.72□□□□□ -0.05
SNX17-203ENST00000440760 BLNKQ8WV28 456 aa14.72□□□□□ -0.05
SNX17-203ENST00000440760 FN1P02751 2386 aaKnown RBP14.72□□□□□ -0.05
SNX17-203ENST00000440760 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.71□□□□□ -0.05
SNX17-203ENST00000440760 GGTLC3B5MD39 225 aa14.71□□□□□ -0.05
SNX17-203ENST00000440760 ZNF207O43670 478 aaKnown RBP14.71□□□□□ -0.05
SNX17-203ENST00000440760 TAGLN2P37802 199 aaKnown RBP14.71□□□□□ -0.05
SNX17-203ENST00000440760 FLI1Q01543 452 aaPredicted RBP14.71□□□□□ -0.05
SNX17-203ENST00000440760 TEX38Q6PEX7 206 aa14.71□□□□□ -0.05
SNX17-203ENST00000440760 RPUSD4Q96CM3 377 aaKnown RBP14.71□□□□□ -0.05
SNX17-203ENST00000440760 A0A0G2JLM5 398 aa14.71□□□□□ -0.06
SNX17-203ENST00000440760 ZNF98A6NK75 572 aa14.71□□□□□ -0.06
SNX17-203ENST00000440760 NPPCP23582 126 aa14.71□□□□□ -0.06
SNX17-203ENST00000440760 ZNF343Q6P1L6 599 aa14.71□□□□□ -0.06
SNX17-203ENST00000440760 ZNF418Q8TF45 676 aaPredicted RBP14.71□□□□□ -0.06
SNX17-203ENST00000440760 SCO2A0A1W2PP80 73 aa14.7□□□□□ -0.06
SNX17-203ENST00000440760 CLDN34H7C241 214 aa14.7□□□□□ -0.06
SNX17-203ENST00000440760 BMPR1BO00238 502 aa14.7□□□□□ -0.06
SNX17-203ENST00000440760 RPL15P61313 204 aaKnown RBP14.7□□□□□ -0.06
SNX17-203ENST00000440760 ZNF674Q2M3X9 581 aa14.7□□□□□ -0.06
SNX17-203ENST00000440760 HIST2H2BDQ6DRA6 164 aa14.7□□□□□ -0.06
SNX17-203ENST00000440760 C20orf24Q9BUV8 137 aa14.7□□□□□ -0.06
SNX17-203ENST00000440760 RABAC1Q9UI14 185 aa14.7□□□□□ -0.06
SNX17-203ENST00000440760 CLPSL1A2RUU4 121 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 RNASE1P07998 156 aaKnown RBP14.69□□□□□ -0.06
SNX17-203ENST00000440760 HILS1P60008 231 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 RELQ04864 619 aaPredicted RBP14.69□□□□□ -0.06
SNX17-203ENST00000440760 FOXE3Q13461 319 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 SVBPQ8N300 66 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 ATP6V0BQ99437 205 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 DERL1Q9BUN8 251 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms