RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 STPG3Q8N7X2 389 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 TSKUQ8WUA8 353 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 ALKBH7Q9BT30 221 aaPredicted RBP11.36□□□□□ -0.59
LIMD1-202ENST00000440097 HILPDAQ9Y5L2 63 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 A0A1W2PN81 502 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 TMEM8BA6NDV4 472 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 K7EP13 123 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 IGHV3-48P01763 117 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 CDKN1BP46527 198 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 GNG4P50150 75 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 MRPL54Q6P161 138 aaKnown RBP11.35□□□□□ -0.59
LIMD1-202ENST00000440097 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 OR4P4Q8NGL7 312 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 OR4A5Q8NH83 315 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 RNASE2P10153 161 aaKnown RBP11.35□□□□□ -0.59
LIMD1-202ENST00000440097 PQLC2Q6ZP29 291 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
LIMD1-202ENST00000440097 KLRD1Q13241 179 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 C2orf83Q53S99 150 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
LIMD1-202ENST00000440097 HELZ2Q9BYK8 2649 aaKnown RBP11.34□□□□□ -0.59
LIMD1-202ENST00000440097 NOTCH2Q04721 2471 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 RBP4P02753 201 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 RHOBP62745 196 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 RPL19P84098 196 aaKnown RBP11.34□□□□□ -0.59
LIMD1-202ENST00000440097 WT1-ASQ06250 92 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 C8orf46Q8TAG6 207 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 CDC42EP3Q9UKI2 254 aa11.34□□□□□ -0.59
LIMD1-202ENST00000440097 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
LIMD1-202ENST00000440097 HELTA6NFD8 242 aa11.33□□□□□ -0.59
LIMD1-202ENST00000440097 MT-CO2P00403 227 aa11.33□□□□□ -0.59
LIMD1-202ENST00000440097 CRYBB3P26998 211 aa11.33□□□□□ -0.59
LIMD1-202ENST00000440097 HTR1DP28221 377 aa11.33□□□□□ -0.59
LIMD1-202ENST00000440097 AMY1AP04745 511 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 GATA2P23769 480 aaPredicted RBP11.33□□□□□ -0.6
LIMD1-202ENST00000440097 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
LIMD1-202ENST00000440097 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 HCP5Q6MZN7 132 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 C19orf35Q6ZS72 473 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 DOPEY2Q9Y3R5 2298 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 OR10J4P0C629 311 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 FBLN7Q53RD9 439 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 LY6G5BQ8NDX9 201 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 OR2T6Q8NHC8 308 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 IGFBPL1Q8WX77 278 aa11.33□□□□□ -0.6
LIMD1-202ENST00000440097 A0A1W2PPI3 338 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 TIMM23O14925 209 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 CD24P25063 80 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 FBXL15Q9H469 300 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 APCSP02743 223 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 AREGP15514 252 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 ATP5IP56385 69 aaPredicted RBP11.32□□□□□ -0.6
LIMD1-202ENST00000440097 CD69Q07108 199 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 HES1Q14469 280 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 MIR17HGQ75NE6 70 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 OSTCQ9NRP0 149 aa11.32□□□□□ -0.6
LIMD1-202ENST00000440097 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
LIMD1-202ENST00000440097 DOPEY1Q5JWR5 2465 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 RPL27AP46776 148 aaKnown RBP11.31□□□□□ -0.6
LIMD1-202ENST00000440097 EFNA4P52798 201 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 PSG5Q15238 335 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 COX19Q49B96 90 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 SERTAD4Q9NUC0 356 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 CCDC168Q8NDH2 2452 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 IGKV1OR2-108A0A075B7D4 117 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 IGHV2-70DA0A0C4DH43 119 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 CEACAM3P40198 252 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 TEX45Q8NA69 505 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 SIGLEC9Q9Y336 463 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 ABCA1O95477 2261 aa11.31□□□□□ -0.6
LIMD1-202ENST00000440097 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 SLAQ13239 276 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 TIGITQ495A1 244 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 Q56UQ5 140 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 C18orf32Q8TCD1 76 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 CNIH1O95406 144 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
LIMD1-202ENST00000440097 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
LIMD1-202ENST00000440097 LDLRAD2Q5SZI1 272 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 ERASQ7Z444 233 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 OR4F17Q8NGA8 305 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 OR2D3Q8NGH3 330 aa11.3□□□□□ -0.6
LIMD1-202ENST00000440097 TRAV9-2A0A087WT02 112 aa11.29□□□□□ -0.6
LIMD1-202ENST00000440097 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
LIMD1-202ENST00000440097 SMIM27A0A1W2PRY6 76 aa11.29□□□□□ -0.6
LIMD1-202ENST00000440097 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
LIMD1-202ENST00000440097 M0R1W7 72 aa11.29□□□□□ -0.6
LIMD1-202ENST00000440097 IGLL1P15814 213 aa11.29□□□□□ -0.6
LIMD1-202ENST00000440097 IBA57Q5T440 356 aaKnown RBP11.29□□□□□ -0.6
LIMD1-202ENST00000440097 NPIPB3Q92617 1050 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms