RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GOLT1AQ6ZVE7 132 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 SRSF12Q8WXF0 261 aaKnown RBP10.76□□□□□ -0.69
ACTN1-204ENST00000438964 GPR82Q96P67 336 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 A8MWL6 223 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 C9orf172C9J069 976 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 NBEAP1P0C6P0 100 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 CCL3L1P16619 93 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 CACNG7P62955 275 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 FAM231DQ6ZW35 169 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 NEU4Q8WWR8 484 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-204ENST00000438964 WFDC12Q8WWY7 111 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 RITA1Q96K30 269 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 C18orf15Q96N68 181 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 AP5S1Q9NUS5 200 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 C1RLQ9NZP8 487 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
ACTN1-204ENST00000438964 IGKV1D-37A0A075B6S9 117 aa10.75□□□□□ -0.69
ACTN1-204ENST00000438964 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.75□□□□□ -0.69
ACTN1-204ENST00000438964 COX8AP10176 69 aa10.75□□□□□ -0.69
ACTN1-204ENST00000438964 A0A0G2JLM5 398 aa10.75□□□□□ -0.69
ACTN1-204ENST00000438964 A0A1W2PNU3 283 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-204ENST00000438964 SRRM5B3KS81 715 aa10.75□□□□□ -0.69
ACTN1-204ENST00000438964 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
ACTN1-204ENST00000438964 SMIM12Q96EX1 92 aa10.75□□□□□ -0.69
ACTN1-204ENST00000438964 KBTBD11-OT1A0A1B0GTJ5 212 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 C22orf46C9J442 243 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 F2RL2O00254 374 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 TIMM23BQ5SRD1 257 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 PAX2Q02962 417 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 C2orf83Q53S99 150 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 PMS2CLQ68D20 193 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 TMEM108Q6UXF1 575 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 RBPMS2Q6ZRY4 209 aaKnown RBP10.74□□□□□ -0.69
ACTN1-204ENST00000438964 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 Q9H3A6 140 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 IGHV1-18A0A0C4DH31 117 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 ERHP84090 104 aaKnown RBP10.74□□□□□ -0.69
ACTN1-204ENST00000438964 FA2HQ7L5A8 372 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 OR2K2Q8NGT1 345 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 CHCHD1Q96BP2 118 aaKnown RBP10.74□□□□□ -0.69
ACTN1-204ENST00000438964 S4R3C0 116 aa10.74□□□□□ -0.69
ACTN1-204ENST00000438964 DLL1O00548 723 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 ENSAO43768 121 aaKnown RBP10.73□□□□□ -0.69
ACTN1-204ENST00000438964 SLC25A17O43808 307 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 KIR2DS2P43631 304 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 CLUHP3Q96NS8 147 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 ZNF747Q9BV97 191 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 NBASA2RRP1 2371 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 RAI1Q7Z5J4 1906 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-204ENST00000438964 G3V4G9 280 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 M0R1B8 84 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 PLP1P60201 277 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 PET117Q6UWS5 81 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 TMEM186Q96B77 213 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 MRPL32Q9BYC8 188 aaKnown RBP10.73□□□□□ -0.69
ACTN1-204ENST00000438964 HSPB8Q9UJY1 196 aa10.73□□□□□ -0.69
ACTN1-204ENST00000438964 KLRC4-KLRK1H3BQV0 150 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 C9orf106Q8NAJ2 232 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 PPP1R35Q8TAP8 253 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 AGRNO00468 2067 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 TEX48A0A1B0GUV7 120 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 TCRBV4S1A1TA0A5B7 111 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 CGB1A6NKQ9 187 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 FSTL3O95633 263 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 TCRAP04437 139 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 GCSHP23434 173 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 LYZP61626 148 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 UFSP1Q6NVU6 142 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 INO80CQ6PI98 192 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-204ENST00000438964 ATP5L2Q7Z4Y8 100 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 IGFBPL1Q8WX77 278 aa10.72□□□□□ -0.69
ACTN1-204ENST00000438964 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 IGKV3-15P01624 115 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 GTF2H5Q6ZYL4 71 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 MLST8Q9BVC4 326 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 FGF6P10767 208 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 WT1P19544 449 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-204ENST00000438964 SRSF6Q13247 344 aaKnown RBP10.71□□□□□ -0.69
ACTN1-204ENST00000438964 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 Q6ZT83 130 aa10.71□□□□□ -0.69
ACTN1-204ENST00000438964 RPUSD1Q9UJJ7 312 aaKnown RBP10.71□□□□□ -0.69
ACTN1-204ENST00000438964 D6R8Y8 96 aa10.71□□□□□ -0.7
ACTN1-204ENST00000438964 NDUFA4L2Q9NRX3 87 aa10.71□□□□□ -0.7
ACTN1-204ENST00000438964 DKK2Q9UBU2 259 aa10.71□□□□□ -0.7
ACTN1-204ENST00000438964 PPIAL4CA0A0B4J2A2 164 aa10.7□□□□□ -0.7
ACTN1-204ENST00000438964 PPIAL4GP0DN37 164 aa10.7□□□□□ -0.7
ACTN1-204ENST00000438964 FCGR2BP31994 310 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-204ENST00000438964 KIR2DL2P43627 348 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-204ENST00000438964 CCL8P80075 99 aa10.7□□□□□ -0.7
ACTN1-204ENST00000438964 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
ACTN1-204ENST00000438964 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
ACTN1-204ENST00000438964 ADTRPQ96IZ2 230 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms