RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 LYZP61626 148 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 SMCO1Q147U7 214 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 CTF1Q16619 201 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 NMSQ5H8A3 153 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 EBLN2Q6P2I7 272 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 ZNF767PQ75MW2 155 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 OR4B1Q8NGF8 309 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 OR51S1Q8NGJ8 323 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 OR4C16Q8NGL9 310 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 OR1S1Q8NH92 325 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 LHFPL5Q8TAF8 219 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 GPR146Q96CH1 333 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 DIRAS2Q96HU8 199 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 C7orf50Q9BRJ6 194 aaKnown RBP5.6□□□□□ -1.51
VPS50-204ENST00000438395 RTBDNQ9BSG5 229 aaPredicted RBP5.6□□□□□ -1.51
VPS50-204ENST00000438395 NAA50Q9GZZ1 169 aaKnown RBP5.6□□□□□ -1.51
VPS50-204ENST00000438395 CELA1Q9UNI1 258 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 GOLT1BQ9Y3E0 138 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 RFNGQ9Y644 331 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 HLA-DRB4X5D2U9 266 aa5.6□□□□□ -1.51
VPS50-204ENST00000438395 A0A0B4J2A0 478 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 SMIM9A6NGZ8 99 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 BUB3O43684 328 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 HBE1P02100 147 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 HTN3P15516 51 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 S100A7P31151 101 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 FAUP35544 74 aaKnown RBP5.59□□□□□ -1.51
VPS50-204ENST00000438395 PSMB3P49720 205 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 ATP5IP56385 69 aaPredicted RBP5.59□□□□□ -1.51
VPS50-204ENST00000438395 RAB11AP62491 216 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 C12orf74Q32Q52 190 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 SOHLH1Q5JUK2 328 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 C1orf194Q5T5A4 169 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 SPATA31B1PQ5VZV4 182 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 FOXI2Q6ZQN5 318 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 OR8I2Q8N0Y5 310 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 POM121L12Q8N7R1 296 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 CSNK1G2-AS1Q8NCQ2 148 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 TMEM208Q9BTX3 173 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 RSL24D1Q9UHA3 163 aaKnown RBP5.59□□□□□ -1.51
VPS50-204ENST00000438395 SHPKQ9UHJ6 478 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 TMEM56-RWDD3S4R434 201 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.51
VPS50-204ENST00000438395 SNRPGP15A8MWD9 76 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 ISLRO14498 428 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 CTDSP2O14595 271 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 GALR1P47211 349 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 MEOX2P50222 304 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 FXYD7P58549 80 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 AP3S2P59780 193 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 SUPT4H1P63272 117 aaKnown RBP5.58□□□□□ -1.52
VPS50-204ENST00000438395 RPP30P78346 268 aaKnown RBP5.58□□□□□ -1.52
VPS50-204ENST00000438395 OR2F1Q13607 317 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 FAM210BQ96KR6 192 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 NEU1Q99519 415 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 MRPS26Q9BYN8 205 aaKnown RBP5.58□□□□□ -1.52
VPS50-204ENST00000438395 MIXL1Q9H2W2 232 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 RBKSQ9H477 322 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 RPRMQ9NS64 109 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 HSPB7Q9UBY9 170 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 GPR132Q9UNW8 380 aa5.58□□□□□ -1.52
VPS50-204ENST00000438395 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 M0R2N4 97 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 CTDSPLO15194 276 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 MED6O75586 246 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 CFDP00746 253 aaPredicted RBP5.57□□□□□ -1.52
VPS50-204ENST00000438395 SMIM18P0DKX4 95 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 GPX4P36969 197 aaPredicted RBP5.57□□□□□ -1.52
VPS50-204ENST00000438395 PSG9Q00887 426 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 ZNF90Q03938 601 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 GAMTQ14353 236 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 RRN3P1Q2M238 152 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 GGNBP1Q5YKI7 109 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 ZNF705AQ6ZN79 300 aaPredicted RBP5.57□□□□□ -1.52
VPS50-204ENST00000438395 TMED4Q7Z7H5 227 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 RAB2BQ8WUD1 216 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 TMEM170AQ8WVE7 144 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 C16orf92Q96LL3 132 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 CIB3Q96Q77 187 aaPredicted RBP5.57□□□□□ -1.52
VPS50-204ENST00000438395 NIPSNAP3BQ9BS92 247 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 MAGT1Q9H0U3 335 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 SAV1Q9H4B6 383 aaPredicted RBP5.57□□□□□ -1.52
VPS50-204ENST00000438395 CCDC59Q9P031 241 aaKnown RBP5.57□□□□□ -1.52
VPS50-204ENST00000438395 TMED3Q9Y3Q3 217 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
VPS50-204ENST00000438395 DNAH10Q8IVF4 4471 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 AGRNO00468 2067 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 LOC102723971A0A1B0GUV8 181 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 DUXBA0A1W2PPF3 345 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 ANKRD20A5PA0PJZ0 165 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 PRSS29PA6NIE9 313 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 ZNF705FA8MVS1 300 aaPredicted RBP5.56□□□□□ -1.52
VPS50-204ENST00000438395 ZNF705DP0CH99 300 aaPredicted RBP5.56□□□□□ -1.52
VPS50-204ENST00000438395 ZNF705BP0CI00 300 aaPredicted RBP5.56□□□□□ -1.52
VPS50-204ENST00000438395 IAPPP10997 89 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 DAD1P61803 113 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 AKR1C1Q04828 323 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 SPCS2Q15005 226 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 FAM222AQ5U5X8 452 aa5.56□□□□□ -1.52
VPS50-204ENST00000438395 FAM78BQ5VT40 261 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms