RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RFNGQ9Y644 331 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 HLA-DRB4X5D2U9 266 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 A0A0B4J2A0 478 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 SMIM9A6NGZ8 99 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 BUB3O43684 328 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 HBE1P02100 147 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 HTN3P15516 51 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 S100A7P31151 101 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 FAUP35544 74 aaKnown RBP5.59□□□□□ -1.51
VPS50-203ENST00000436177 PSMB3P49720 205 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 ATP5IP56385 69 aaPredicted RBP5.59□□□□□ -1.51
VPS50-203ENST00000436177 RAB11AP62491 216 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 C12orf74Q32Q52 190 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 SOHLH1Q5JUK2 328 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 C1orf194Q5T5A4 169 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 SPATA31B1PQ5VZV4 182 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 FOXI2Q6ZQN5 318 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 OR8I2Q8N0Y5 310 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 POM121L12Q8N7R1 296 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 CSNK1G2-AS1Q8NCQ2 148 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 TMEM208Q9BTX3 173 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 RSL24D1Q9UHA3 163 aaKnown RBP5.59□□□□□ -1.51
VPS50-203ENST00000436177 SHPKQ9UHJ6 478 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 TMEM56-RWDD3S4R434 201 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.51
VPS50-203ENST00000436177 SNRPGP15A8MWD9 76 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 ISLRO14498 428 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 CTDSP2O14595 271 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 VAMP1P23763 118 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 GALR1P47211 349 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 MEOX2P50222 304 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 FXYD7P58549 80 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 AP3S2P59780 193 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 SUPT4H1P63272 117 aaKnown RBP5.58□□□□□ -1.52
VPS50-203ENST00000436177 RPP30P78346 268 aaKnown RBP5.58□□□□□ -1.52
VPS50-203ENST00000436177 OR2F1Q13607 317 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 FAM210BQ96KR6 192 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 NEU1Q99519 415 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 MRPS26Q9BYN8 205 aaKnown RBP5.58□□□□□ -1.52
VPS50-203ENST00000436177 MIXL1Q9H2W2 232 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 RBKSQ9H477 322 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 RPRMQ9NS64 109 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 HSPB7Q9UBY9 170 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 GPR132Q9UNW8 380 aa5.58□□□□□ -1.52
VPS50-203ENST00000436177 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 M0R2N4 97 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 CTDSPLO15194 276 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 MED6O75586 246 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 CFDP00746 253 aaPredicted RBP5.57□□□□□ -1.52
VPS50-203ENST00000436177 SMIM18P0DKX4 95 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 GPX4P36969 197 aaPredicted RBP5.57□□□□□ -1.52
VPS50-203ENST00000436177 PSG9Q00887 426 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 ZNF90Q03938 601 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 GAMTQ14353 236 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 RRN3P1Q2M238 152 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 GGNBP1Q5YKI7 109 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 ZNF705AQ6ZN79 300 aaPredicted RBP5.57□□□□□ -1.52
VPS50-203ENST00000436177 TMED4Q7Z7H5 227 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 RAB2BQ8WUD1 216 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 TMEM170AQ8WVE7 144 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 C16orf92Q96LL3 132 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 CIB3Q96Q77 187 aaPredicted RBP5.57□□□□□ -1.52
VPS50-203ENST00000436177 NIPSNAP3BQ9BS92 247 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 MAGT1Q9H0U3 335 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 SAV1Q9H4B6 383 aaPredicted RBP5.57□□□□□ -1.52
VPS50-203ENST00000436177 PRR13Q9NZ81 148 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 CCDC59Q9P031 241 aaKnown RBP5.57□□□□□ -1.52
VPS50-203ENST00000436177 TMED3Q9Y3Q3 217 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
VPS50-203ENST00000436177 DNAH10Q8IVF4 4471 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 AGRNO00468 2067 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 LOC102723971A0A1B0GUV8 181 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 DUXBA0A1W2PPF3 345 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 ANKRD20A5PA0PJZ0 165 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 PRSS29PA6NIE9 313 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 ZNF705FA8MVS1 300 aaPredicted RBP5.56□□□□□ -1.52
VPS50-203ENST00000436177 ZNF705DP0CH99 300 aaPredicted RBP5.56□□□□□ -1.52
VPS50-203ENST00000436177 ZNF705BP0CI00 300 aaPredicted RBP5.56□□□□□ -1.52
VPS50-203ENST00000436177 IAPPP10997 89 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 DAD1P61803 113 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 AKR1C1Q04828 323 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 SPCS2Q15005 226 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 FAM222AQ5U5X8 452 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 FAM78BQ5VT40 261 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 LYZL2Q7Z4W2 148 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 S100A7AQ86SG5 101 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 BPIFCQ8NFQ6 507 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 GPR82Q96P67 336 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 TRGV9Q99603 122 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 ATG101Q9BSB4 218 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 TMEM147Q9BVK8 224 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 WDR12Q9GZL7 423 aaKnown RBP5.56□□□□□ -1.52
VPS50-203ENST00000436177 SLC25A22Q9H936 323 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 KIAA1109Q2LD37 5005 aa5.56□□□□□ -1.52
VPS50-203ENST00000436177 IGLV2-18A0A075B6J9 118 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 FABP12A6NFH5 140 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 INSP01308 110 aa5.55□□□□□ -1.52
VPS50-203ENST00000436177 DEFB1P60022 68 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms