RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 VDAC2P45880 294 aaPredicted RBP6.1□□□□□ -1.43
CPSF6-202ENST00000435070 HBBP68871 147 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 ATP5G2Q06055 141 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 SPINK14Q6IE38 97 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 COLCA1Q6ZS62 124 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 NAV3Q8IVL0 2385 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 A0A1W2PPM0 123 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 WFDC2Q14508 124 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 ETDBQ3ZM63 59 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 WDR86Q86TI4 376 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 RNF138Q8WVD3 245 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF257Q9Y2Q1 563 aa6.1□□□□□ -1.43
CPSF6-202ENST00000435070 FCGR2BP31994 310 aaPredicted RBP6.09□□□□□ -1.43
CPSF6-202ENST00000435070 IGF2BP2-AS1Q96M15 143 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 TTTY13Q9BZ97 58 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 MBNL3Q9NUK0 354 aaKnown RBP6.09□□□□□ -1.43
CPSF6-202ENST00000435070 LMO7DNF2Z398 122 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 OR5A1Q8NGJ0 315 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 OR13A1Q8NGR1 328 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 C19orf24Q9BVV8 132 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 METRNQ9UJH8 293 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 A1L4Q6 167 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 SRSF6Q13247 344 aaKnown RBP6.09□□□□□ -1.43
CPSF6-202ENST00000435070 KRTAP27-1Q3LI81 207 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 SAMD5Q5TGI4 173 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 PCP2Q8IVA1 136 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 ZBTB34Q8NCN2 500 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 MS4A6AQ9H2W1 248 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 PROK2Q9HC23 129 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 UBE2L6O14933 153 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 PROP1O75360 226 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 APOHP02749 345 aaPredicted RBP6.09□□□□□ -1.43
CPSF6-202ENST00000435070 SP1P08047 785 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 ASCL2Q99929 193 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 IGKV1OR2-108A0A075B7D4 117 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 ORM2P19652 201 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 TIMM23BQ5SRD1 257 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 RND1Q92730 232 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 C1RLQ9NZP8 487 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 CYSLTR1Q9Y271 337 aa6.09□□□□□ -1.43
CPSF6-202ENST00000435070 A8MWL6 223 aa6.09□□□□□ -1.44
CPSF6-202ENST00000435070 SMAD7O15105 426 aaKnown RBP6.09□□□□□ -1.44
CPSF6-202ENST00000435070 TWIST1Q15672 202 aa6.09□□□□□ -1.44
CPSF6-202ENST00000435070 LINC00596Q86U02 117 aa6.09□□□□□ -1.44
CPSF6-202ENST00000435070 CCDC144NLQ6NUI1 221 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 LINC00322Q6ZN03 302 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-202ENST00000435070 ZNF48Q96MX3 618 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-202ENST00000435070 CACNA1EQ15878 2313 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 IGHV3OR15-7A0A075B7D8 119 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PRSS46E5RG02 174 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 C8orf88P0DMB2 117 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 ACP1P24666 158 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PRR20EP86478 221 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PRR20CP86479 221 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PRR20DP86480 221 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PRR20BP86481 221 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PRR20AP86496 221 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 AMTNQ6UX39 209 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 IGHV3OR16-12A0A075B7B8 117 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 KIR2DS2P43631 304 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 TMEM177Q53S58 311 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 C19orf54Q5BKX5 351 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 MPC1Q9Y5U8 109 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 CCL21O00585 134 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PEX7O00628 323 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 CELA3AP09093 270 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 SP9P0CG40 484 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 FAM106CPP0CH98 169 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 ECSCRQ19T08 205 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-202ENST00000435070 FAM106AQ4KMX7 169 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 WIPF2Q8TF74 440 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-202ENST00000435070 CXXC4Q9H2H0 198 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 LRP4O75096 1905 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 GGNQ86UU5 652 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 ARPC1AQ92747 370 aa6.08□□□□□ -1.44
CPSF6-202ENST00000435070 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
CPSF6-202ENST00000435070 PSMB11A5LHX3 300 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 PPIFP30405 207 aaKnown RBP6.07□□□□□ -1.44
CPSF6-202ENST00000435070 SFTA2Q6UW10 78 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 COQ2Q96H96 371 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 DSPP15924 2871 aaKnown RBP6.07□□□□□ -1.44
CPSF6-202ENST00000435070 GAGE2BQ13066 116 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 GAGE2EQ4V326 116 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 CHCHD1Q96BP2 118 aaKnown RBP6.07□□□□□ -1.44
CPSF6-202ENST00000435070 GAGE2DQ9UEU5 116 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 INSL3P51460 131 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 TMPRSS3P57727 454 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 ZFAND6Q6FIF0 208 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 GTSF1Q8WW33 167 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 CEP250Q9BV73 2442 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 DKK1O94907 266 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 P01737 135 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 LOXL1Q08397 574 aaPredicted RBP6.07□□□□□ -1.44
CPSF6-202ENST00000435070 EIF4EBP1Q13541 118 aaPredicted RBP6.07□□□□□ -1.44
CPSF6-202ENST00000435070 RRN3P1Q2M238 152 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 NRN1LQ496H8 165 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 UTF1Q5T230 341 aa6.07□□□□□ -1.44
CPSF6-202ENST00000435070 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
CPSF6-202ENST00000435070 OCIAD1Q9NX40 245 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms