RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PEX7O00628 323 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 FAM106CPP0CH98 169 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 RPL15P61313 204 aaKnown RBP9.44□□□□□ -0.9
CTCFL-209ENST00000433949 ARPC1AQ92747 370 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
CTCFL-209ENST00000433949 THYN1Q9P016 225 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 V9GYV3 84 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 ITPR3Q14573 2671 aa9.44□□□□□ -0.9
CTCFL-209ENST00000433949 IGHV3-21A0A0B4J1V1 117 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 IFITM10A6NMD0 228 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 RD3LP0DJH9 198 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 BRS3P32247 399 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 DSCR9P59020 149 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 YPEL3P61236 119 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-209ENST00000433949 COX19Q49B96 90 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 GPR61Q9BZJ8 451 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 TMEM14CQ9P0S9 112 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 TRBV9A0A0B4J1U6 114 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 A0A1W2PRD5 423 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 A0A1W2PRF3 423 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 A0A1W2PRM7 423 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 NCBP2LA6PVI3 153 aaKnown RBP9.43□□□□□ -0.9
CTCFL-209ENST00000433949 SCGB2A1O75556 95 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 IGLV2-8P01709 118 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 GP9P14770 177 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 TMEM11P17152 192 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 CX3CL1P78423 397 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 IBA57Q5T440 356 aaKnown RBP9.43□□□□□ -0.9
CTCFL-209ENST00000433949 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 RBM14Q96PK6 669 aaKnown RBP9.43□□□□□ -0.9
CTCFL-209ENST00000433949 CHRDL1Q9BU40 450 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 NIT2Q9NQR4 276 aa9.43□□□□□ -0.9
CTCFL-209ENST00000433949 POLR3KQ9Y2Y1 108 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-209ENST00000433949 SETXQ7Z333 2677 aaKnown RBP9.43□□□□□ -0.9
CTCFL-209ENST00000433949 CREBBPQ92793 2442 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 ABCA2Q9BZC7 2435 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 CSPG4Q6UVK1 2322 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 MYO9AB2RTY4 2548 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 XKRY2A2RUG3 117 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 IGKV1-17P01599 117 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 CD24P25063 80 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 LYZP61626 148 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
CTCFL-209ENST00000433949 OR5I1Q13606 314 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 TMEM183BQ1AE95 376 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 LURAP1LQ8IV03 231 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 C5orf17Q8NAS9 161 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 MRPL27Q9P0M9 148 aaKnown RBP9.42□□□□□ -0.9
CTCFL-209ENST00000433949 EPDR1Q9UM22 224 aa9.42□□□□□ -0.9
CTCFL-209ENST00000433949 IGLV11-55A0A075B6I3 123 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 SLC17A3O00476 420 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 TOMM40O96008 361 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 HIST1H1BP16401 226 aaKnown RBP9.41□□□□□ -0.9
CTCFL-209ENST00000433949 UBE2G1P62253 170 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 FAM231DQ6ZW35 169 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 KRTAP1-3Q8IUG1 177 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 LRRC75A-AS1Q8N1F1 130 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 DYNAPQ8N1N2 210 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 MBD6Q96DN6 1003 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 TMEM68Q96MH6 324 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-209ENST00000433949 FLNAP21333 2647 aaKnown RBP9.41□□□□□ -0.9
CTCFL-209ENST00000433949 ZFHX3Q15911 3703 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 TEX15Q9BXT5 2789 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 TLN2Q9Y4G6 2542 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 SMAD7O15105 426 aaKnown RBP9.41□□□□□ -0.9
CTCFL-209ENST00000433949 SLC25A5P05141 298 aaKnown RBP9.41□□□□□ -0.9
CTCFL-209ENST00000433949 MGST1P10620 155 aaKnown RBP9.41□□□□□ -0.9
CTCFL-209ENST00000433949 SLC25A16P16260 332 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 MFAP4P55083 255 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 GFI1BQ5VTD9 330 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 BAGE2Q86Y30 109 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 TBX15Q96SF7 602 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 FAM103A1Q9BTL3 118 aaKnown RBP9.41□□□□□ -0.9
CTCFL-209ENST00000433949 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
CTCFL-209ENST00000433949 PGPA6NDG6 321 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 GNG7O60262 68 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 HLA-DRB1P01911 266 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 MT-ND6P03923 174 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.9
CTCFL-209ENST00000433949 FABP4P15090 132 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 DNLZQ5SXM8 178 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 ZNF600Q6ZNG1 722 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 CIARTQ8N365 385 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-209ENST00000433949 OR10D4PQ8NGN7 298 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 GSX1Q9H4S2 264 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-209ENST00000433949 ACANP16112 2415 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 AKAP9Q99996 3911 aa9.4□□□□□ -0.9
CTCFL-209ENST00000433949 PDZD11Q5EBL8 140 aa9.4□□□□□ -0.91
CTCFL-209ENST00000433949 WDR73Q6P4I2 378 aa9.4□□□□□ -0.91
CTCFL-209ENST00000433949 BPIFA4PQ86YQ2 179 aa9.4□□□□□ -0.91
CTCFL-209ENST00000433949 RNF125Q96EQ8 232 aa9.4□□□□□ -0.91
CTCFL-209ENST00000433949 FMC1Q96HJ9 113 aa9.4□□□□□ -0.91
CTCFL-209ENST00000433949 FANCD2OSQ96PS1 177 aa9.4□□□□□ -0.91
CTCFL-209ENST00000433949 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.91
CTCFL-209ENST00000433949 GNB1LQ9BYB4 327 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms