RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PRB3Q04118 309 aaPredicted RBP0.46□□□□□ -2.34
CDC40-204ENST00000431461 HAGHLQ6PII5 290 aaPredicted RBP0.46□□□□□ -2.34
CDC40-204ENST00000431461 LINC00575Q6W349 94 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 GOLT1AQ6ZVE7 132 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 CLECL1Q8IZS7 167 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 OR10AG1Q8NH19 301 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 ADAT3Q96EY9 351 aaPredicted RBP0.46□□□□□ -2.34
CDC40-204ENST00000431461 CHMP6Q96FZ7 201 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 TMEM126AQ9H061 195 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 OR52A1Q9UKL2 312 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 FAM32AQ9Y421 112 aaKnown RBP0.46□□□□□ -2.34
CDC40-204ENST00000431461 ROS1P08922 2347 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 RIMBP3CA6NJZ7 1639 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 RIMBP3BA6NNM3 1639 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 RIMBP3Q9UFD9 1639 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 A0A087WSZ3 146 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 CCL25O15444 150 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 ERC2-IT1O76042 136 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 GADD45GO95257 159 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 IFNA4P05014 189 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 HLA-EP13747 358 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 COX7CP15954 63 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 VBP1P61758 197 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 ARF6P62330 175 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 IFT20Q8IY31 132 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 OR52R1Q8NGF1 315 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 OR5D14Q8NGL3 314 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 OR10K1Q8NGX5 313 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 WFDC5Q8TCV5 224 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 PARD6GQ9BYG4 376 aaPredicted RBP0.45□□□□□ -2.34
CDC40-204ENST00000431461 PBOV1Q9GZY1 135 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 RNASE7Q9H1E1 156 aaKnown RBP0.45□□□□□ -2.34
CDC40-204ENST00000431461 OPTCQ9UBM4 332 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 PYCARDQ9ULZ3 195 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 RNF11Q9Y3C5 154 aa0.45□□□□□ -2.34
CDC40-204ENST00000431461 CHCHD2Q9Y6H1 151 aaPredicted RBP0.45□□□□□ -2.34
CDC40-204ENST00000431461 TNRC6AQ8NDV7 1962 aaKnown RBP0.45□□□□□ -2.34
CDC40-204ENST00000431461 ARHGEF28Q8N1W1 1705 aaKnown RBP0.44□□□□□ -2.34
CDC40-204ENST00000431461 ZNF106Q9H2Y7 1883 aaKnown RBP0.44□□□□□ -2.34
CDC40-204ENST00000431461 NCAPD3P42695 1498 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 TRAV27A0A087WT01 109 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 TRAV10A0A0B4J240 114 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 TRAV5A0A0B4J249 113 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 DUXBA0A1W2PPF3 345 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 TLCD2A6NGC4 264 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 H3BRM9 83 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 TAX1BP3O14907 124 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 IFNA14P01570 189 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 IGLV3-1P01715 115 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 IFNA6P05013 189 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 ZNF25P17030 456 aaPredicted RBP0.44□□□□□ -2.34
CDC40-204ENST00000431461 HOXA6P31267 233 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 RAB5CP51148 216 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 FXYD6P3P58550 94 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 ERVS71-1P61550 626 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 CDK6Q00534 326 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 DEFB113Q30KQ7 82 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 ZNF833PQ6ZTB9 187 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 PDZD9Q8IXQ8 264 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 MUCL1Q96DR8 90 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 MALSU1Q96EH3 234 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 LINC00052Q96N35 136 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 PHB2Q99623 299 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 PRRT1Q99946 306 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 TCEAL2Q9H3H9 227 aaPredicted RBP0.44□□□□□ -2.34
CDC40-204ENST00000431461 ENY2Q9NPA8 101 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 MED29Q9NX70 200 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 LAMTOR3Q9UHA4 124 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 OBSL1O75147 1896 aa0.44□□□□□ -2.34
CDC40-204ENST00000431461 LAMA4Q16363 1823 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 KIAA1549Q9HCM3 1950 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 CEP192Q8TEP8 1941 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 PLXND1Q9Y4D7 1925 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 TRAV3A0A0B4J244 114 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 F8W1H4 67 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 HMGB3O15347 200 aaKnown RBP0.43□□□□□ -2.34
CDC40-204ENST00000431461 LYRM1O43325 122 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 PIAS1O75925 651 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 DNAL4O96015 105 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 CXCL8P10145 99 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 DEFA1P59665 94 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 AKR1C8PQ5T2L2 129 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 SPATA8Q6RVD6 105 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 GRINAQ7Z429 371 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 OR5AS1Q8N127 324 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 PSMF1Q92530 271 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 C9orf16Q9BUW7 83 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 NPCDR1Q9BY65 106 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 ARMC1Q9NVT9 282 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 UBAP1Q9NZ09 502 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 PCTPQ9UKL6 214 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 CCDC144AA2RUR9 1427 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 ADGRL3Q9HAR2 1447 aa0.43□□□□□ -2.34
CDC40-204ENST00000431461 NCOA6Q14686 2063 aaPredicted RBP0.42□□□□□ -2.34
CDC40-204ENST00000431461 UBR2Q8IWV8 1755 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 SCN3AQ9NY46 2000 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 HECW2Q9P2P5 1572 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 UHRF1BP1Q6BDS2 1440 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 OR2T8A6NH00 312 aa0.42□□□□□ -2.34
CDC40-204ENST00000431461 G3V2T6 193 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms