RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 HBBP68871 147 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 SRSF12Q8WXF0 261 aaKnown RBP4.32□□□□□ -1.72
PTPN4-203ENST00000430976 BCL2L10Q9HD36 194 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 LAMTOR3Q9UHA4 124 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 RNF114Q9Y508 228 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 HLA-DRB4X5D2U9 266 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 LRRK1Q38SD2 2015 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 PCNX3Q9H6A9 2034 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 YPEL1O60688 119 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 CST6Q15828 149 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 COMMD6Q7Z4G1 85 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 ZAR1Q86SH2 424 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 AQP10Q96PS8 301 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 YPEL2Q96QA6 119 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 IFI27L2Q9H2X8 130 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 KIAA1210Q9ULL0 1709 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 USP32Q8NFA0 1604 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 PCNTO95613 3336 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-203ENST00000430976 SLIT3O75094 1523 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 NDUFS5O43920 106 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 EGR2P11161 476 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-203ENST00000430976 ZNF138P52744 262 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 Q0VG73 95 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 SOSTDC1Q6X4U4 206 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-203ENST00000430976 SPTSSAQ969W0 71 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 FAM3DQ96BQ1 224 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 NEXMIFQ5QGS0 1516 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 CCL1P22362 96 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 MS4A13Q5J8X5 152 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 C12orf73Q69YU5 71 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 SCGB1D4Q6XE38 83 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 PGLYRP4Q96LB8 373 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 DOCK4Q8N1I0 1966 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 CD163L1Q9NR16 1453 aa4.31□□□□□ -1.72
PTPN4-203ENST00000430976 SORL1Q92673 2214 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 NCOR1O75376 2440 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 S100A4P26447 101 aaKnown RBP4.3□□□□□ -1.72
PTPN4-203ENST00000430976 LY6DQ14210 128 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 SLC25A48Q6ZT89 311 aaKnown RBP4.3□□□□□ -1.72
PTPN4-203ENST00000430976 DCTN5Q9BTE1 182 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 NMES1Q9C002 83 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 QSER1Q2KHR3 1735 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 LAMB4A4D0S4 1761 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 MYOFQ9NZM1 2061 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 C8orf87E5RJ46 101 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 APCSP02743 223 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 HDHD3Q9BSH5 251 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-203ENST00000430976 NPCDR1Q9BY65 106 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 TANC1Q9C0D5 1861 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 PXDNQ92626 1479 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 IGLL5B9A064 214 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 C11orf98E9PRG8 122 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 ATOX1O00244 68 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 SSSCA1O60232 199 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 IGFBP6P24592 240 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-203ENST00000430976 CXCL5P42830 114 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 RPL23P62829 140 aaKnown RBP4.3□□□□□ -1.72
PTPN4-203ENST00000430976 LYPD6Q86Y78 171 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 ELSPBP1Q96BH3 223 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 RPRMQ9NS64 109 aa4.3□□□□□ -1.72
PTPN4-203ENST00000430976 COX8AP10176 69 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 EBLN2Q6P2I7 272 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 NOTCH4Q99466 2003 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 KIF13BQ9NQT8 1826 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 USP54Q70EL1 1684 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 IGHG3P01860 377 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 FOXF1Q12946 379 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 PCP2Q8IVA1 136 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 DCANP1Q8TF63 244 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 TAF15Q92804 592 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPN4-203ENST00000430976 SLC25A15Q9Y619 301 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 TRAV8-3A0A0A6YYJ7 113 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 PRYO14603 147 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 CR2P20023 1033 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPN4-203ENST00000430976 CLEC19AQ6UXS0 136 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 SHANK2-AS3Q9BTD1 123 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 TAAR2Q9P1P5 351 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 RNF7Q9UBF6 113 aa4.29□□□□□ -1.72
PTPN4-203ENST00000430976 J3QL48 77 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 FXYD4P59646 89 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 CYP2G1PQ6ZSU1 146 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 NFE4Q86UQ8 179 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 MDP1Q86V88 176 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 ZNF721Q8TF20 911 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 Q96M66 194 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 Q9H8V8 135 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 KIF1AQ12756 1690 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 FANCMQ8IYD8 2048 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 ARHGEF28Q8N1W1 1705 aaKnown RBP4.28□□□□□ -1.72
PTPN4-203ENST00000430976 MYBPHLA2RUH7 354 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 LINC01553A4QN01 128 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 H3BMM0 161 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 FXYD2P54710 66 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 SSBP1Q04837 148 aaKnown RBP4.28□□□□□ -1.72
PTPN4-203ENST00000430976 LGALS9BQ3B8N2 356 aa4.28□□□□□ -1.72
PTPN4-203ENST00000430976 DEFB106AQ8N104 65 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms