RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRR20EP86478 221 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRR20CP86479 221 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRR20DP86480 221 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRR20BP86481 221 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRR20AP86496 221 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 MIR17HGQ75NE6 70 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 FAM19A5Q7Z5A7 132 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 MOB3BQ86TA1 216 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 MRAPQ8TCY5 172 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 TIMM8BQ9Y5J9 83 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 ADAMTS20P59510 1910 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 IGKV3D-11A0A0A0MRZ8 115 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 HAX1O00165 279 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 DUX1O43812 170 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 CD24P25063 80 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 LYRM7Q5U5X0 104 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRSS3P2Q8NHM4 247 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 SSMEM1Q8WWF3 244 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 C1orf159Q96HA4 380 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 DUX5Q96PT3 197 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRSS22Q9GZN4 317 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZNF576Q9H609 170 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 HCFC1P51610 2035 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 EXPH5Q8NEV8 1989 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 DNPH1O43598 174 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 IGKV3-11P04433 115 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 RPL7P18124 248 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 CFHR1Q03591 330 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 TBC1D28Q2M2D7 210 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 LINC00596Q86U02 117 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 CDX2Q99626 313 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 SPRY4Q9C004 299 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 RPP21Q9H633 154 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZMAT4Q9H898 229 aa7.16□□□□□ -1.26
CDC42BPA-206ENST00000429440 MUC3AQ02505 3323 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 A8MWV9 139 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 C9JAW5 83 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 C20orf204Q6ZNR8 217 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 GATD1Q8NB37 220 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 OR1L8Q8NGR8 309 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZNF503Q96F45 646 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 PLPPR2Q96GM1 343 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 ENY2Q9NPA8 101 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 HIGD1AQ9Y241 93 aa7.15□□□□□ -1.26
CDC42BPA-206ENST00000429440 HEATR1Q9H583 2144 aaKnown RBP7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 CRYGSP22914 178 aa7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 DEFB133Q30KQ1 61 aa7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 KLF17Q5JT82 389 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 C10orf128Q5T292 105 aa7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 MORN3Q6PF18 240 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 CIARTQ8N365 385 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 AMMECR1Q9Y4X0 333 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-206ENST00000429440 SRRM4A7MD48 611 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 IL4P05112 153 aa7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 UCNP55089 124 aa7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 IFI27L1Q96BM0 104 aa7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 SGK494Q96LW2 274 aa7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 SLC25A2Q9BXI2 301 aa7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF492Q9P255 531 aa7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 HHLA3Q9XRX5 114 aa7.14□□□□□ -1.27
CDC42BPA-206ENST00000429440 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 F5H768 121 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 HOXA3O43365 443 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 HBDP02042 147 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 MRPL23Q16540 153 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 IFI27L2Q9H2X8 130 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 LMO7DNF2Z398 122 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 CRLF1O75462 422 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 OR1C1Q15619 314 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 OR1L4Q8NGR5 311 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 TMEM101Q96IK0 257 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 PGLYRP4Q96LB8 373 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 SPANXDQ9BXN6 97 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 C21orf62Q9NYP8 219 aa7.13□□□□□ -1.27
CDC42BPA-206ENST00000429440 PEX7O00628 323 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 NPFFO15130 113 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 ACTL6BO94805 426 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 SP1P08047 785 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF137PP52743 207 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 NXPH1P58417 271 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 UBE2D3P61077 147 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 UBE2D2P62837 147 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF816Q0VGE8 651 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 EIF4EBP1Q13541 118 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 KRTAP27-1Q3LI81 207 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 FADS6Q8N9I5 356 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 OR13A1Q8NGR1 328 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 NABP1Q96AH0 204 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 NABP2Q9BQ15 211 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 PRADC1Q9BSG0 188 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 AKIRIN1Q9H9L7 192 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 COL6A3P12111 3177 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 PCSK5Q92824 1860 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 ASCC3Q8N3C0 2202 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 LOC107984640A0A0U1RRK4 108 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 DUSP14O95147 198 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 ORM2P19652 201 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms