RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 UBTD1Q9HAC8 227 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
THBS3-202ENST00000428962 HELZ2Q9BYK8 2649 aaKnown RBP10.84□□□□□ -0.67
THBS3-202ENST00000428962 PLXNB1O43157 2135 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 CDKN1AP38936 164 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 EFNA4P52798 201 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 ZNF562Q6V9R5 426 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 MBD6Q96DN6 1003 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 ZNF48Q96MX3 618 aaPredicted RBP10.84□□□□□ -0.67
THBS3-202ENST00000428962 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
THBS3-202ENST00000428962 RPH3ALQ9UNE2 315 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 TBL2Q9Y4P3 447 aaKnown RBP10.84□□□□□ -0.67
THBS3-202ENST00000428962 A0A1W2PRD5 423 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 A0A1W2PRF3 423 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 A0A1W2PRM7 423 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 SCGB2A1O75556 95 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 TCRAP04437 139 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 RAB4BP61018 213 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 EBI3Q14213 229 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 BAGE3Q86Y29 109 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 NUDT10Q8NFP7 164 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 WIPF2Q8TF74 440 aaPredicted RBP10.83□□□□□ -0.68
THBS3-202ENST00000428962 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 SHANK2-AS3Q9BTD1 123 aa10.83□□□□□ -0.68
THBS3-202ENST00000428962 H3BRN7 92 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 SPINK4O60575 86 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 OR10J3Q5JRS4 329 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 LEMD1Q68G75 181 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 PRR27Q6MZM9 219 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 MRPL54Q6P161 138 aaKnown RBP10.82□□□□□ -0.68
THBS3-202ENST00000428962 BPIFA4PQ86YQ2 179 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 Q8N6K4 173 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 OR4F17Q8NGA8 305 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 TSKUQ8WUA8 353 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 ITLN2Q8WWU7 325 aaPredicted RBP10.82□□□□□ -0.68
THBS3-202ENST00000428962 SIRPDQ9H106 197 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 C7orf69Q9H7B7 122 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 THYN1Q9P016 225 aa10.82□□□□□ -0.68
THBS3-202ENST00000428962 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
THBS3-202ENST00000428962 IGHV2-70DA0A0C4DH43 119 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 A0A1W2PPR1 153 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 NCBP2LA6PVI3 153 aaKnown RBP10.81□□□□□ -0.68
THBS3-202ENST00000428962 GNG7O60262 68 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 LTAP01374 205 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 SNRPCP09234 159 aaKnown RBP10.81□□□□□ -0.68
THBS3-202ENST00000428962 TMEM11P17152 192 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 BTF3P20290 206 aaKnown RBP10.81□□□□□ -0.68
THBS3-202ENST00000428962 CD24P25063 80 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 MFAP4P55083 255 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 SLC35B1P78383 322 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 LBHQ53QV2 105 aaPredicted RBP10.81□□□□□ -0.68
THBS3-202ENST00000428962 C9orf152Q5JTZ5 239 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 RNF125Q96EQ8 232 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 MS4A10Q96PG2 267 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 FAM103A1Q9BTL3 118 aaKnown RBP10.81□□□□□ -0.68
THBS3-202ENST00000428962 C1RLQ9NZP8 487 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 ZNF492Q9P255 531 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 IGLV11-55A0A075B6I3 123 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 A0A1B0GUS0 222 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 SERF1AO75920 110 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 CA1P00915 261 aaPredicted RBP10.81□□□□□ -0.68
THBS3-202ENST00000428962 ZFP36P26651 326 aaKnown RBP10.81□□□□□ -0.68
THBS3-202ENST00000428962 CT83Q5H943 113 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 ZNF586Q9NXT0 402 aa10.81□□□□□ -0.68
THBS3-202ENST00000428962 ABCA4P78363 2273 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 TOX4O94842 621 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 APCSP02743 223 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 IL4P05112 153 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 FAM106CPP0CH98 169 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 ZNF124Q15973 351 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 ATP5L2Q7Z4Y8 100 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 LYPD1Q8N2G4 141 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 IGFBPL1Q8WX77 278 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
THBS3-202ENST00000428962 RPP21Q9H633 154 aaKnown RBP10.8□□□□□ -0.68
THBS3-202ENST00000428962 TP53TG3Q9ULZ0 132 aa10.8□□□□□ -0.68
THBS3-202ENST00000428962 TRBV6-1A0A0K0K1D8 114 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 WI2-2373I1.2A0A1W2PRP0 233 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 FRMD6-AS1P0C7T7 363 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 DDTP30046 118 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 BRS3P32247 399 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 UBE2E1P51965 193 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 Q86TA4 180 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 DYNAPQ8N1N2 210 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 FAM168AQ92567 244 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 DAZAP1Q96EP5 407 aaKnown RBP10.79□□□□□ -0.68
THBS3-202ENST00000428962 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 A8MWL6 223 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 H3BTX0 84 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 K7EQM0 130 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 NUPR1O60356 82 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 SCGB1D1O95968 90 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 P01737 135 aa10.79□□□□□ -0.68
THBS3-202ENST00000428962 HLA-DRB1P01911 266 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms