RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SPATA3Q8NHX4 192 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 MAP1LC3BQ9GZQ8 125 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 IFITM10A6NMD0 228 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 TCF21O43680 179 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 IFNA1P01562 189 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 CRYGCP07315 174 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 OR10J1P30954 320 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 ADMP35318 185 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 RAB9AP51151 201 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 OR5AU1Q8NGC0 362 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 PSMB11A5LHX3 300 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 LINC00587B1AMM8 73 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 CLDN34H7C241 214 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 TGOLN2O43493 480 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BKO60814 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 YIF1AO95070 293 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BJP06899 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 RNASE1P07998 156 aaKnown RBP7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BOP23527 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BBP33778 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BDP58876 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BCP62807 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 CFHR3Q02985 330 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST2H2BEQ16778 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 VWC2Q2TAL6 325 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 Q56UQ5 140 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 RPP25LQ8N5L8 163 aaKnown RBP7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 FAM110DQ8TAY7 271 aaPredicted RBP7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BHQ93079 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 ZNF414Q96IQ9 312 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BNQ99877 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 HIST1H2BMQ99879 126 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 TMEM147Q9BVK8 224 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 NPCDR1Q9BY65 106 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 TMEM160Q9NX00 188 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 URGCP-MRPS24S4R325 110 aa7.37□□□□□ -1.23
HMGCLL1-206ENST00000428842 TRBV24-1A0A075B6N3 115 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 NPIPB5A8MRT5 1133 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 H3BTX0 84 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 PHOX2AO14813 284 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 CYB5BO43169 146 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 IGKV1-17P01599 117 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 S100PP25815 95 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 CD81P60033 236 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 CTDSP1Q9GZU7 261 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 SLC39A9Q9NUM3 307 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 CTXND1A0A1B0GTU2 59 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 PSMB8P28062 276 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 NDUFA6P56556 154 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 UNQ9165/PRO28630Q6UXU0 137 aa7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 CITED2Q99967 270 aaPredicted RBP7.36□□□□□ -1.23
HMGCLL1-206ENST00000428842 TRBV9A0A0B4J1U6 114 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 M0QZK8 103 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 IGLV1-40P01703 118 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 MBP02144 154 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 TRGC2P03986 189 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 CTSGP08311 255 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 ORM2P19652 201 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 CYP2G1PQ6ZSU1 146 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 STPG3Q8N7X2 389 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 FAM210BQ96KR6 192 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 GGACTQ9BVM4 153 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 GGTLC1Q9BX51 225 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 SEPSECSQ9HD40 501 aaKnown RBP7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 SEC14L6B5MCN3 397 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 TMEM250H0YL14 139 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 APOHP02749 345 aaPredicted RBP7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 PSG1P11464 419 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 MEF2BQ02080 365 aaPredicted RBP7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 KRTAP24-1Q3LI83 254 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 C8orf86Q6ZUL3 223 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 SLC25A22Q9H936 323 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 C21orf62Q9NYP8 219 aa7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 LSM4Q9Y4Z0 139 aaKnown RBP7.35□□□□□ -1.23
HMGCLL1-206ENST00000428842 GNG7O60262 68 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 IGLC1P0CG04 106 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 SUB1P53999 127 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 NSUN5P1Q3KNT7 163 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 ZNF114Q8NC26 417 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 OR4X2Q8NGF9 303 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 CACNG8Q8WXS5 425 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 FRZBQ92765 325 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 PYGO2Q9BRQ0 406 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 GAR1Q9NY12 217 aaKnown RBP7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 WDR83OSQ9Y284 106 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 RNF114Q9Y508 228 aa7.34□□□□□ -1.23
HMGCLL1-206ENST00000428842 TRGC1P0CF51 173 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 FFAR4Q5NUL3 377 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 HIST3H2BBQ8N257 126 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR10G9Q8NGN4 311 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR10G7Q8NGN6 311 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 TMEM37Q8WXS4 190 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 SLC35E1Q96K37 410 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms